| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2655 |
|---|
| Symbol | |
|---|
| ID | 7315374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2798542 |
|---|
| End bp | 2799861 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643617556 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_002514717 |
|---|
| Protein GI | 220935818 |
|---|
| COG category | [K] Transcription
[S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein
[COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA ATGACATCCA GGTCCGCATG CGGGCCGTGC TGGAATACCG GGACCTGCGC
AGCCTGCCGC GCTGGAAGCG CCCCCTGATC GGTGCCCTGC GCATCGCCTG GGGCATCGGC
CGGGAGGTCA CCGAGGGGCA GCTCACCCTG CGGGCCATGA GCCTGGTCTA CACCACATTG
CTGTCCATGG TGCCCCTGCT GGCCCTGTCG TTTTCCGTGC TCAAGGCCTT CGGGGCTCAC
AACCAGCTGG AGCCCCTGCT GCTCAGCCTC CTGGAGCCCC TGGGTCCCCA GGGGGTGGAG
GTGGCGGAAA ACGTCATTGG TTTTGTGGAT AACATGCGTG TCGGCGTGCT GGGCTTTATC
GGCCTGATAT TCCTTATCTA TACCGTGATC GCGCTGGTGC AGAAGATCGA GAGCGCCTTC
AACTACACCT GGCGCATCAA CGGCACCCGG GGCCTGGCCC AGCGTTTCAG CAATTATCTG
AGCGTGATCC TGGTGGGTCC GGTGCTGGTG GTCTCGGCCC TGGGGATCAC CGCCTCCATC
ATGGCCACCT CGGTGATGCA GCAGGCCATG GAGGTGCAGC TGCTGGGCGA GGCGGTGCAG
CTGGCCGGGC GCATGGTGCC CTACCTGCTG ATCATGGGCG CCTTCATGTT CGTCTATGTG
TTTGTGCCCA ATACCCGGGT GAAGCTCCTG CCCGCCCTGG TGGGCGCCGT GGTGGCGGGT
CTGCTCTGGC AGAGCACCGG CTGGATCTTC GCCGCCATGA TGGCCGGCTC CACCCGCTAC
GCGGCCATCT ACTCCAGCTT CGCCATCATG ATCATGCTGC TCATCTGGAT CTACCTGAGC
TGGCTGATCC TGCTGATCGG TGCCAACGTG GCCTTCTTCG TCCAGTATCC GGAGTACATG
CTGGTGCGTC GCGGGCAGGT GCAGCTCTCC AGCGCCCTGA AGGAGCGCCT GGCCCTGCGG
GTGATGAAAT CCATCGGCAC GCGTTTTCAC GAGGGCAGGG GCCCCACGCC TCTGGACGAC
CTGGCCCATG AACTGGACAT GCCCGTGGAG GCCGTGGAGC GGGTCACCGA CGCCCTGCGC
AAGGCGGGCC TGCTGGTCAC CGCCGGTCAG GACCCGGTCA GTTTCGTCCC CGGCCGGGAC
ACCGGCCAGA TCACCCTCAA GGCCTGCCTG GACGCCGTGC GCGGCGCCGA CAGCACCGTG
CCGGGACCCC GGGGGGAGGA CGAATCGGTG GACACGCTCA TGGAGGCGCT GGATCGGGCA
CTGGGCGAGC GGCTGGAGGG GGTGACACTG GCGGCGCTTG TTGAGCGCCA GGGGAAGTGA
|
|---|
| Protein sequence | MTLNDIQVRM RAVLEYRDLR SLPRWKRPLI GALRIAWGIG REVTEGQLTL RAMSLVYTTL
LSMVPLLALS FSVLKAFGAH NQLEPLLLSL LEPLGPQGVE VAENVIGFVD NMRVGVLGFI
GLIFLIYTVI ALVQKIESAF NYTWRINGTR GLAQRFSNYL SVILVGPVLV VSALGITASI
MATSVMQQAM EVQLLGEAVQ LAGRMVPYLL IMGAFMFVYV FVPNTRVKLL PALVGAVVAG
LLWQSTGWIF AAMMAGSTRY AAIYSSFAIM IMLLIWIYLS WLILLIGANV AFFVQYPEYM
LVRRGQVQLS SALKERLALR VMKSIGTRFH EGRGPTPLDD LAHELDMPVE AVERVTDALR
KAGLLVTAGQ DPVSFVPGRD TGQITLKACL DAVRGADSTV PGPRGEDESV DTLMEALDRA
LGERLEGVTL AALVERQGK
|
|---|
| |