| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2648 |
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| Symbol | |
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| ID | 7315367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2787916 |
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| End bp | 2789724 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643617549 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002514710 |
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| Protein GI | 220935811 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGC TTCATTTCAG ATCCCGGATC ACCGGGGCGT TTGTGCTTTC ATCCTGCCTG
TTCGTCGCAC CGCTTGAGGC CGCCGACGAA CTGGAACCCA TCATCGTCAC CACGCCGATG
CGCATGGCGC AGACCGTGGA TGACAGCCTG CACCCGGTAT CGGTCATCAC CCGGGAAGAC
ATCGAACGAC TGCAACCGAA CAGCGTGCCG GAGCTGATCC GTGGCCTGCC CGGTGTGCAG
GTCGGCGCCA GTGGCGGCTT CGGCAAGCAG ACCGGTGTGT TCCTGCGTGG CGCCAATGCC
AACCAGATGA TCGTGCTGGT GGATGGTGTG CGCGCGGGTT CCGCCACTGC CGGCGGCGCC
GCCTGGGAAT TCATCCCGGT GGATCAGATC GAGCGCATCG AGGTGGTGCG CGGTCCGAGG
GCCAGCGCCT ACGGGGCCGA TGCGGTGGGC GGCGTGATCC AGATCTTCAC CCGCAGCCCG
GCGCGTGAGC CCGTGCGCGA GCTTATGGTG GGCTACGGGC GCTACAACAC CCGCCAGGCC
AGTGCGTCCG TCTCGGCGGA CAGCGGTGCC TGGCGCTACC ACCTGGGCGC CAGTCACCTG
GCCAGCGACG GCTACGATGT GCTGCGCGGC GGCGACCCTG ACGATGACGG TTATCGCAAC
GATGCCGTCA ATGCACGCCT GGGCTACCGT ATGGACAACG GCGTTGACCT TGAGTGGCGG
CTGTTGCGCG CCCAGGGTCG CACGGAGTTC GACTCCTTGT GGACGTCCGG AACACACGAG
GAGGACTTCG TCCAGCAGGC CGCCTCGGTG CAGCTTTCCG GCCCGGCGGG CAGTGCGGGC
GGCTGGCGCG TGATCGCGGG CGAGACCCGT GATGAGCGCG ACACCCTGGA TGGCGATGGC
CGTTATCGCT ATGACACCCG CCGCCGCAAT CTCAGCGCGC AGACGGACTG GCTGTTGAGC
CGTACACAGC TGAGCCTGGG GGCGGATTAT CTGCATGACC AGGTCTCCGG CAGCACGGAC
TTTGCCCGGG ACAGTCGCGA CAGTCGCGCC GTGTTCGCGC AGCTGCACTC GGAGTGGTCC
CGCCATCAGT TCGGCGCGGG CCTGCGCAAC GACTGGTACA GCGATTTCGG CACCCATGGC
ACCGGCGACC TGGCCTGGGC CTACAGGCTC GACGAGGCCT GGCGGATCCG GGGCAGCGCA
GGCACGGCCT TCAGGGCACC GACCTTCAAC GACCTGTACT TCCCCTGGGG ACTCGGCAAC
CCGGACCTCG ACCCGGAACG CGCCCGCAAT CTGGAGGCGG GCCTGGAGTA CGGCCGGGCA
GGCCACCGGC TGGGTCTGAA TGTCTTCGAG AATCGGGTCC GTGATCTGAT CATCTATGAC
ACGGACACGT TCACCATGCA GAACATCAAC CGGGCCCGCA TCACCGGTGC GGAGGCCAGC
TGGCAGTGGG CCGGGCGGGA CTGGCAGCTC GCGGCCAGCT ACACCTGGTT GCATGCCCGG
GACGAGGCGA CCGGCAATCA GTTGCCCCGT CGCGCACGTC ACAGTGCCCG CCTGGACGCG
GACCGATCCC TCGGCGCACT GCGCTACGGT CTCAGCCTGA TCGGGCAGGG ACGACGCTAT
GACGATCCGT CCAATACCCT CGAACTGCCC GGCTATGTCA CCATGGACCT GCGCGGGGGG
TACCGGCTGG ATCGTCACTG GGAACTCTCC GCCGCCTGGA ACAACGTGTT CGACCGGGAC
TACGAGACCG TGGCCGGTTA CCGTCAGCCG GGGCAGGCAT TGAACGTATC CCTGCGCGGC
AGGTTCTGA
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| Protein sequence | MQGLHFRSRI TGAFVLSSCL FVAPLEAADE LEPIIVTTPM RMAQTVDDSL HPVSVITRED
IERLQPNSVP ELIRGLPGVQ VGASGGFGKQ TGVFLRGANA NQMIVLVDGV RAGSATAGGA
AWEFIPVDQI ERIEVVRGPR ASAYGADAVG GVIQIFTRSP AREPVRELMV GYGRYNTRQA
SASVSADSGA WRYHLGASHL ASDGYDVLRG GDPDDDGYRN DAVNARLGYR MDNGVDLEWR
LLRAQGRTEF DSLWTSGTHE EDFVQQAASV QLSGPAGSAG GWRVIAGETR DERDTLDGDG
RYRYDTRRRN LSAQTDWLLS RTQLSLGADY LHDQVSGSTD FARDSRDSRA VFAQLHSEWS
RHQFGAGLRN DWYSDFGTHG TGDLAWAYRL DEAWRIRGSA GTAFRAPTFN DLYFPWGLGN
PDLDPERARN LEAGLEYGRA GHRLGLNVFE NRVRDLIIYD TDTFTMQNIN RARITGAEAS
WQWAGRDWQL AASYTWLHAR DEATGNQLPR RARHSARLDA DRSLGALRYG LSLIGQGRRY
DDPSNTLELP GYVTMDLRGG YRLDRHWELS AAWNNVFDRD YETVAGYRQP GQALNVSLRG
RF
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