| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2631 |
|---|
| Symbol | |
|---|
| ID | 7315350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2774397 |
|---|
| End bp | 2775083 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643617532 |
|---|
| Product | electron transport complex RsxE subunit |
|---|
| Protein accession | YP_002514693 |
|---|
| Protein GI | 220935794 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
|---|
| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.854749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGACA TCAGCTACCG CGAGATCAAT GCCAACGGCT TCTGGCACAA CAACCCGGGG
CTGGTACAGC TGCTGGGCCT GTGTCCGCTG CTGGCCATCT CCGGCACGGT GGTCAACGCC
CTGGGGCTGG GCCTGGCCAC CACCCTCACC CTGGTGGCCT CCAACGTCAC CGTATCCCTG
ATCCGTCACT GGGTGCGCCC GGAGATCCGC ATCCCGGTGT TCGTGCTGAT CATCGCCTCG
GTGGTGACCG CCATCGAGCT GGCCATGAAC GCCTTCTTCC ACGAGCTGTA CCTGATCCTG
GGCATCTTCA TCCCCCTGAT CGTCACCAAC TGCGCCATCA TCGGCCGCGC CGAGGCCTTC
GCCTCCAAGC AGCCTATCCC CAAGGCCCTG GCCGACGGCC TGGCCATGGG CCTGGGCTTC
ACCTGCGTGC TGGTGGCCCT GGGGGCGCTG CGCGAGGCGG TGGGCCACGG CACCCTGCTG
GCGGACGCGC ACCTGATGTT CGGCGAGGCC GCGCGGGGCT TCAGCCTGAC CCTGTTCGAG
GAATACCGGG GCTTCCTGCT GGCCCTGCTC CCCCCCGGCG CCTTCATCGC CCTGGGCCTG
CTGATCGCGC TGAAGAACAT CATCGACGCC CGCCTGCAGA AGCGCCAACC TGCCCAGGCC
GCGGTGCCTG TGGAAGCGGC GGGCTGA
|
|---|
| Protein sequence | MSDISYREIN ANGFWHNNPG LVQLLGLCPL LAISGTVVNA LGLGLATTLT LVASNVTVSL
IRHWVRPEIR IPVFVLIIAS VVTAIELAMN AFFHELYLIL GIFIPLIVTN CAIIGRAEAF
ASKQPIPKAL ADGLAMGLGF TCVLVALGAL REAVGHGTLL ADAHLMFGEA ARGFSLTLFE
EYRGFLLALL PPGAFIALGL LIALKNIIDA RLQKRQPAQA AVPVEAAG
|
|---|
| |