| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2594 |
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| Symbol | |
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| ID | 7315691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2737185 |
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| End bp | 2738351 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643617495 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_002514656 |
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| Protein GI | 220935757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG CCACATTTGG GGAATTCTGG GAGCTTGTCA CACAGGTATG GCGTGAGGGC
GTGTTTGGCA TCAATATTTC AGACACTCTG ATTGCTCTTT CAATATTCCT GTTATTCCTG
CTGTTGAGGA ATGTCTTAAG TCGTTTTCTT TTGCGTGCGC TTGAGCGGGC AGCCTCGCGA
ACCAGATCAA ATCTGGATGA CCGTATCATT AACGCGCTGT ACGACCCAAT CCGGTTCATT
CCGGTAGTGA TGGGAGTGTT TTTTGCTCTG AGTGTGCTTG AGGTCGACGA GGGTAAGCGC
GAGGTGTTTT ACAACCTCAA TCGCACCCTG ATCGCGTTTA CGCTTTTCTG GGCCTTTTAC
CGCATTACGA CCCCTGTGGG TTCTCTGCTG CTCAAGGCAG AGGGTGTGCT CACACGTCCG
ATGGTCGACT GGATTGTCAA AGCGGCGAAG ATTGCTTTTG TGGTGCTGGG CGTAGCCACA
ATATTGGAAC TCTGGGGGAT TGCGGTGGGG CCGATCATCG CCGGCCTCGG CCTGTTCGGT
GTCGCCCTCG CGCTGGGTGC TCAGGACCTG TTCAAGAATC TGATTGCAGG CCTTTTCGTG
ATCGGCGAAC GTCGTTTCCA GCCCGGGGAC TGGATCCATG TGGATGGCGT AGTGGAGGGA
ACGGTCCAGC AGATCGGGTT TCGTACCACC ACGGTACGTC GGTTCGATCG TGCCCCCGTC
TATGTCCCCA ATGCCCGCCT CGCGGACAGC GCGGTCACGA ATTTCTCACG CATGAGCCAC
CGTCGTATCC GCTGGATGCT TGGTGTTGAG TACAGAACCA CCCTTGAGCA GCTCAAGCAG
ATCAGAGACG GCATCGAGAG ATATATTCTG GAAAACGAGG AATTCGCAAA GCCAGATGAT
GTGCCGACTT TCGTGCGCAT AGACTCCTTC AATGACAGCT CCATCGACAT CCTGGTGTAC
TGCTTTACCA CCACCACGGT CTGGGGCGAC TGGCTGGAGA TCAAGGAACG CCTGGCCTAC
GCCATCAAGG AGATCGTCGA GAGCGCGGGC ACAGGCTTCG CCTTCCCGAG CCGGTCTTTG
TACCTGGAAA GCCTTCCCGA TGCGCCCGAG GTTTTTCCTC TCTCTCCGCC GCCTACAGGC
ACTGCGCAGT CCGGTCAAAA TCCCTGA
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| Protein sequence | MDIATFGEFW ELVTQVWREG VFGINISDTL IALSIFLLFL LLRNVLSRFL LRALERAASR
TRSNLDDRII NALYDPIRFI PVVMGVFFAL SVLEVDEGKR EVFYNLNRTL IAFTLFWAFY
RITTPVGSLL LKAEGVLTRP MVDWIVKAAK IAFVVLGVAT ILELWGIAVG PIIAGLGLFG
VALALGAQDL FKNLIAGLFV IGERRFQPGD WIHVDGVVEG TVQQIGFRTT TVRRFDRAPV
YVPNARLADS AVTNFSRMSH RRIRWMLGVE YRTTLEQLKQ IRDGIERYIL ENEEFAKPDD
VPTFVRIDSF NDSSIDILVY CFTTTTVWGD WLEIKERLAY AIKEIVESAG TGFAFPSRSL
YLESLPDAPE VFPLSPPPTG TAQSGQNP
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