| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2589 |
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| Symbol | |
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| ID | 7315686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2730974 |
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| End bp | 2733253 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643617490 |
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| Product | hypothetical protein |
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| Protein accession | YP_002514651 |
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| Protein GI | 220935752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.394973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCG TGGGAATGGA CTACCAGTCG GAGTACTACA AGGCGATCAC CTATATCCGG
GCCAAGATCG ATCAGATGCT GACCCTGATC GGCACCCTGC CGCTGCGCCC TGAAGAGCTG
GATGATCGCA CCCTCATCGA CCTGGATCCC ATCGGCATCG TCAGCGATGC CTTCGGGCAG
ATCCTCTCCC ACCTCCATGA CACCAATCAG AAACTCGATG TGGCGCGTCA GGAGATCCGG
GCCATTTTCG ATTCCATGGA TGCCGCCGTC GTGGTGGTCA ACCACGATGG CAGCATCGAT
GATTGCAACC GGCAGGCCCG GGAGTGGCTG TTCGGAGATC TGGATGCCCA GATGCTGATC
GGAAGACCGC TGGCGGAATT GTGTCCCTGC GACAGGGAAA TACAGCAGCA GGTGATGTCG
GGCAGGGGGC GTGGACAGAC GATAGAGGTG GACGGCCGTC ATCTTCAGAT CATCGTCTCC
GATATCACCG ACGCCCATCA GAACAGCATC AAGAAGGTGG TCATCTGTTT CGACGTCACG
CAACAGAAGA AGACGGAGGC AAGCCTTGGT CTGTATGGCA AGGTCTTCGA GAGCACGGCG
GAAGGGATCG CCATCACCGA CAGCAGAATG CGTTTTCTGC AGGTCAACGA GGCCTACTGC
CGGATCACCG GGTACAGCGA CGGGGAACTC CTGGGCCGGA CGCCTCGCAT GCTCAAGTCA
GGCCATCATG ATGCGGCCTT CTATGCGGAT ATCAGCAAGA CGCTGGAGGT CCGGGGACAC
TGGCGGGGCG AGATCCTGGA TCGTACCCGT GACGGCCGCG TCATTCCCTT GCTGCAGACC
ATCAGCGTGG TGCGCGACAC CCAGGGCGCG GTGAGTCACT ACATCACCAT CGTCACCGAT
ATCTCGTCCA TCAAGGAGAC CCAGAGCCGG TTGGACTTTC TGGCCCACCA CGACCCGCTC
ACCGAGCTTC CCAATCGGCT GCTGTTCACG GCACGGCTCG AGCATGCCAT CGACTGGGCG
GTGCGCAACC AGGCGCACTT CGGCCTGCTG TTCATCGACC TGGACCGGTT CAAGACCATC
AACGACAGCC TGGGTCATCA GCTTGGCGAC AGGCTGCTGG TGCAGGTGGC CAGGCGGTTG
CGGGGGCTGG TGCGCAAGTC GGACACCATC GCCCGCCTGG GCGGTGACGA GTTCGTAGTG
CTGGTCGAGG GTATTCATAA CGCCGGCGAG GCGGAGTTGC TTGCCGAGAA GCTGGTGCAT
GCCATGCGAC AGCCCTTCTT CCTGGAAGAG ACCGAACTGC ACATCGGTTG CAGCATCGGT
ATCACTCTTT ACCCGGAGGA CGGCGAAGAC CCGGTGACCC TGTTGAAGAA TGCAGATGCC
GCCATGTACC GGGTCAAGGA CTTCGGGCGC GACGGGTTCT GCAAGTTCAG CCAGGACCTG
GCCGAGGCCG TCGACGAAAG GCTGGCGCTG GAGACTGCGC TGCGTCAGGC CTTGCGTGAA
AATCAGCTGC AGGTGCATTA CCAGCCGGTG ATCGATCTGG CACAGGGCCG GATGGTGGCG
GTGGAGGCCC TGGCGCGCTG GCGGCATGCG GAGCGGGGCG AGATAGCGCC CTGCAGTTTC
ATCCGCCTGG CCGAGGAGAC CAAGCTCATC CTGCCGCTGG GCGGGTGGAT GGCCCGCACG
GCCATCGGGC AGTTCCGCCT CTGGCGCGAG CGGGGCATGG AGCTGGATTA CGTCTCCATC
AACACCTCGG GGATCGAGTT GTTCGACCCC GGATTCGTGG ACGGATTGTT CGAGGCCCTG
GACGAGCACG GTCTGGAAGG CAGACACCTG CAGATCGAAT TGACGGAGAA CGTGCTCATG
CAGGACTACG AGGCCTGCCG CAGGGTACTG CTGCGCCTGC GTCAGCAGGG GGTGCGTATC
GCCATCGATG ACTTCGGCAC CGGCTACTCG TCTCTGGCCT ACCTCAAGCA GCTGCCCATC
GACATGCTCA AGATCGACAG ATCCTTCATC AAGGATGTGC CGGGGGATCC CGGTGACTGT
GCCATCGTGG AAACCATCAT CGCCATGGCC CACCGGCTGG GGCTCGCCAC GGTGGCCGAG
GGCGTGGAAA CCGAAGAGCA GGAAGACTAT CTGCTGGCCA TCGGTTGTGA GCGCTTGCAG
GGATATCGCT ATGCCAGGCC CCTGGACCCC GTCTCGCTGG AGCGCTTACA CGCGGATTCA
GTCCGGCAAG CGGCGCCGGA CAGCGCGTCG AGTGCTGTTA GGGTTCCAGG GGGCAGGTAA
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| Protein sequence | MSGVGMDYQS EYYKAITYIR AKIDQMLTLI GTLPLRPEEL DDRTLIDLDP IGIVSDAFGQ
ILSHLHDTNQ KLDVARQEIR AIFDSMDAAV VVVNHDGSID DCNRQAREWL FGDLDAQMLI
GRPLAELCPC DREIQQQVMS GRGRGQTIEV DGRHLQIIVS DITDAHQNSI KKVVICFDVT
QQKKTEASLG LYGKVFESTA EGIAITDSRM RFLQVNEAYC RITGYSDGEL LGRTPRMLKS
GHHDAAFYAD ISKTLEVRGH WRGEILDRTR DGRVIPLLQT ISVVRDTQGA VSHYITIVTD
ISSIKETQSR LDFLAHHDPL TELPNRLLFT ARLEHAIDWA VRNQAHFGLL FIDLDRFKTI
NDSLGHQLGD RLLVQVARRL RGLVRKSDTI ARLGGDEFVV LVEGIHNAGE AELLAEKLVH
AMRQPFFLEE TELHIGCSIG ITLYPEDGED PVTLLKNADA AMYRVKDFGR DGFCKFSQDL
AEAVDERLAL ETALRQALRE NQLQVHYQPV IDLAQGRMVA VEALARWRHA ERGEIAPCSF
IRLAEETKLI LPLGGWMART AIGQFRLWRE RGMELDYVSI NTSGIELFDP GFVDGLFEAL
DEHGLEGRHL QIELTENVLM QDYEACRRVL LRLRQQGVRI AIDDFGTGYS SLAYLKQLPI
DMLKIDRSFI KDVPGDPGDC AIVETIIAMA HRLGLATVAE GVETEEQEDY LLAIGCERLQ
GYRYARPLDP VSLERLHADS VRQAAPDSAS SAVRVPGGR
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