Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2589 |
Symbol | |
ID | 7315686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2730974 |
End bp | 2733253 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643617490 |
Product | hypothetical protein |
Protein accession | YP_002514651 |
Protein GI | 220935752 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.394973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGCG TGGGAATGGA CTACCAGTCG GAGTACTACA AGGCGATCAC CTATATCCGG GCCAAGATCG ATCAGATGCT GACCCTGATC GGCACCCTGC CGCTGCGCCC TGAAGAGCTG GATGATCGCA CCCTCATCGA CCTGGATCCC ATCGGCATCG TCAGCGATGC CTTCGGGCAG ATCCTCTCCC ACCTCCATGA CACCAATCAG AAACTCGATG TGGCGCGTCA GGAGATCCGG GCCATTTTCG ATTCCATGGA TGCCGCCGTC GTGGTGGTCA ACCACGATGG CAGCATCGAT GATTGCAACC GGCAGGCCCG GGAGTGGCTG TTCGGAGATC TGGATGCCCA GATGCTGATC GGAAGACCGC TGGCGGAATT GTGTCCCTGC GACAGGGAAA TACAGCAGCA GGTGATGTCG GGCAGGGGGC GTGGACAGAC GATAGAGGTG GACGGCCGTC ATCTTCAGAT CATCGTCTCC GATATCACCG ACGCCCATCA GAACAGCATC AAGAAGGTGG TCATCTGTTT CGACGTCACG CAACAGAAGA AGACGGAGGC AAGCCTTGGT CTGTATGGCA AGGTCTTCGA GAGCACGGCG GAAGGGATCG CCATCACCGA CAGCAGAATG CGTTTTCTGC AGGTCAACGA GGCCTACTGC CGGATCACCG GGTACAGCGA CGGGGAACTC CTGGGCCGGA CGCCTCGCAT GCTCAAGTCA GGCCATCATG ATGCGGCCTT CTATGCGGAT ATCAGCAAGA CGCTGGAGGT CCGGGGACAC TGGCGGGGCG AGATCCTGGA TCGTACCCGT GACGGCCGCG TCATTCCCTT GCTGCAGACC ATCAGCGTGG TGCGCGACAC CCAGGGCGCG GTGAGTCACT ACATCACCAT CGTCACCGAT ATCTCGTCCA TCAAGGAGAC CCAGAGCCGG TTGGACTTTC TGGCCCACCA CGACCCGCTC ACCGAGCTTC CCAATCGGCT GCTGTTCACG GCACGGCTCG AGCATGCCAT CGACTGGGCG GTGCGCAACC AGGCGCACTT CGGCCTGCTG TTCATCGACC TGGACCGGTT CAAGACCATC AACGACAGCC TGGGTCATCA GCTTGGCGAC AGGCTGCTGG TGCAGGTGGC CAGGCGGTTG CGGGGGCTGG TGCGCAAGTC GGACACCATC GCCCGCCTGG GCGGTGACGA GTTCGTAGTG CTGGTCGAGG GTATTCATAA CGCCGGCGAG GCGGAGTTGC TTGCCGAGAA GCTGGTGCAT GCCATGCGAC AGCCCTTCTT CCTGGAAGAG ACCGAACTGC ACATCGGTTG CAGCATCGGT ATCACTCTTT ACCCGGAGGA CGGCGAAGAC CCGGTGACCC TGTTGAAGAA TGCAGATGCC GCCATGTACC GGGTCAAGGA CTTCGGGCGC GACGGGTTCT GCAAGTTCAG CCAGGACCTG GCCGAGGCCG TCGACGAAAG GCTGGCGCTG GAGACTGCGC TGCGTCAGGC CTTGCGTGAA AATCAGCTGC AGGTGCATTA CCAGCCGGTG ATCGATCTGG CACAGGGCCG GATGGTGGCG GTGGAGGCCC TGGCGCGCTG GCGGCATGCG GAGCGGGGCG AGATAGCGCC CTGCAGTTTC ATCCGCCTGG CCGAGGAGAC CAAGCTCATC CTGCCGCTGG GCGGGTGGAT GGCCCGCACG GCCATCGGGC AGTTCCGCCT CTGGCGCGAG CGGGGCATGG AGCTGGATTA CGTCTCCATC AACACCTCGG GGATCGAGTT GTTCGACCCC GGATTCGTGG ACGGATTGTT CGAGGCCCTG GACGAGCACG GTCTGGAAGG CAGACACCTG CAGATCGAAT TGACGGAGAA CGTGCTCATG CAGGACTACG AGGCCTGCCG CAGGGTACTG CTGCGCCTGC GTCAGCAGGG GGTGCGTATC GCCATCGATG ACTTCGGCAC CGGCTACTCG TCTCTGGCCT ACCTCAAGCA GCTGCCCATC GACATGCTCA AGATCGACAG ATCCTTCATC AAGGATGTGC CGGGGGATCC CGGTGACTGT GCCATCGTGG AAACCATCAT CGCCATGGCC CACCGGCTGG GGCTCGCCAC GGTGGCCGAG GGCGTGGAAA CCGAAGAGCA GGAAGACTAT CTGCTGGCCA TCGGTTGTGA GCGCTTGCAG GGATATCGCT ATGCCAGGCC CCTGGACCCC GTCTCGCTGG AGCGCTTACA CGCGGATTCA GTCCGGCAAG CGGCGCCGGA CAGCGCGTCG AGTGCTGTTA GGGTTCCAGG GGGCAGGTAA
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Protein sequence | MSGVGMDYQS EYYKAITYIR AKIDQMLTLI GTLPLRPEEL DDRTLIDLDP IGIVSDAFGQ ILSHLHDTNQ KLDVARQEIR AIFDSMDAAV VVVNHDGSID DCNRQAREWL FGDLDAQMLI GRPLAELCPC DREIQQQVMS GRGRGQTIEV DGRHLQIIVS DITDAHQNSI KKVVICFDVT QQKKTEASLG LYGKVFESTA EGIAITDSRM RFLQVNEAYC RITGYSDGEL LGRTPRMLKS GHHDAAFYAD ISKTLEVRGH WRGEILDRTR DGRVIPLLQT ISVVRDTQGA VSHYITIVTD ISSIKETQSR LDFLAHHDPL TELPNRLLFT ARLEHAIDWA VRNQAHFGLL FIDLDRFKTI NDSLGHQLGD RLLVQVARRL RGLVRKSDTI ARLGGDEFVV LVEGIHNAGE AELLAEKLVH AMRQPFFLEE TELHIGCSIG ITLYPEDGED PVTLLKNADA AMYRVKDFGR DGFCKFSQDL AEAVDERLAL ETALRQALRE NQLQVHYQPV IDLAQGRMVA VEALARWRHA ERGEIAPCSF IRLAEETKLI LPLGGWMART AIGQFRLWRE RGMELDYVSI NTSGIELFDP GFVDGLFEAL DEHGLEGRHL QIELTENVLM QDYEACRRVL LRLRQQGVRI AIDDFGTGYS SLAYLKQLPI DMLKIDRSFI KDVPGDPGDC AIVETIIAMA HRLGLATVAE GVETEEQEDY LLAIGCERLQ GYRYARPLDP VSLERLHADS VRQAAPDSAS SAVRVPGGR
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