| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2588 |
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| Symbol | |
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| ID | 7315685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2729267 |
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| End bp | 2730973 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643617489 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_002514650 |
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| Protein GI | 220935751 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.649054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACGTC AGCTGAGCAT CCTGCTGTTT CTGGCCATCC TGCTGGCCTC CCTGGGCACG
GCCCTGGTGG TGGCCCTGTC GATGTACAGG GAGCTGGTGG CCAGCAGCGA TGCGCATGTC
TCCAGGCTGC ACGATCAGCT CCGGGATCGT TTCCATGCCT TCGACCTGTT GCTTGCGGAA
CAGGAGCAGG GCCTGAACCG CCGCCTGGAG GGCATCCTGC CCCGGGTGGC AGAGGAGCTC
GAGGCCATGG TCGATGACCC CCTGGGCGCC ACGCCCGAGC AGCTGGATCT GCTCAGCGAG
CGCCATGGGG TCTCCTACCT CTACCTCATC GACCGCGCGG GCCGTGTCGC GGCCACCAAT
TTCGCGCCGG ACCTGGGCCT TGAACTGGCG GCCGCCGGCG AGGGCATGCG ACAGATGTTC
GAGCGCCTCT ACGGCAGCGG CCAGATCAAC GCGGACCGGT TCAATGCCTC CATCCACACC
GGTCGGCTGT ACAAATACGC CTACTACGGC CCCCGTGACC GGGACTACAT CCTGGAGGCG
GCGGTGGACC TGCGCGACTA CCTGCAGACC GAGGTGAGCC CGCGCATGGA CCAGTTCCTG
TTCGGGGACC TGCTGCGGCT GGGCACCGCG GACAATGGGC ATGTGACGGA TTTCGACCTG
TTCATCGCCA CCGAGTACGG CGGCTGGTCC CTGTGGCGGG AAGGGCGCCG CCTCGACAGT
CATGTGCTGG AGGCCTTGCG AGGCCACGGT CGCGTGGTGC TGCAGGACAA CGGCGTCCAG
GCTGTCTATG AGCATCTGCG CCGGGTGGAC GCGGACGGCG CCGAGACCGA CAGTCTCATC
ACCCTGGTCG CCTATGACCG CAGCGGTCAG GAGCGGCTGC TGATGAGCTC GGTGGGATTC
GCCCTGCTGC TGGCCGTGGT GCTCGGGGTG CTGGCCTTCC TGGTGGCCCG CGTGATCATG
CAGCGCAGCC TGCTGCGGCC GGTGTTGCAG ATCGTCAGCC GGCTGGACGA CGTGAGCCGG
GGGGAGTTCC GTCGCCTGCC CACCACCGGG GTCTCGGAGC TGGACGTGAT CACCCGGGGC
GTGAACACCA TGCTGGAGCG CATCGACGAC CGCGAGGAGC GCCTGCTGGA GGCCAAGCAT
CAACTGGAGC GGCGGGTGCA GGAGCGGACC GCGGCACTGG AATCCCTCAA TCAACAGCTG
GCGCACCTGG CCACCACCGA CCCGCTGACC GGGCTCGCCA ACCGGCGAAG CTTCTTCGAG
GCCGCCGAGC GGGAACTGGG CCGCTCGCGG CGCGCCGGCT ACGCCACGGT CGTCGCCATG
CTGGACCTGG ATCACTTCAA GGACGTCAAC GATACCCACG GCCACGCCGC GGGGGACCGC
ATCCTGGAGC TGGTCAGCCG CGTGCTCGTC AAGGAACTGC GCGATGCCGA CCTGGTGGGC
CGACTGGGCG GCGAGGAATT CGGCCTGCTG CTGGTGGACG TGAGCGTGGC CCATGCCCGG
GAGATCGTGG AACGCATCCG TACCCGGGTC ATGCACTGCG ACACGGGCCT GGATCTCAGC
GTGACCCTGA GCGCCGGGAT CGCCGACTGC GATCCCGCCA TGCTCGGGCT CGACGTGGCC
ATGGCCCTGG CGGACCGCGC CCTGTACGAG GCCAAGCGCC AGGGACGCAA CCGGGTCATC
ACGCGGGCCA TCGGCAGCCC GTCATGA
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| Protein sequence | MRRQLSILLF LAILLASLGT ALVVALSMYR ELVASSDAHV SRLHDQLRDR FHAFDLLLAE
QEQGLNRRLE GILPRVAEEL EAMVDDPLGA TPEQLDLLSE RHGVSYLYLI DRAGRVAATN
FAPDLGLELA AAGEGMRQMF ERLYGSGQIN ADRFNASIHT GRLYKYAYYG PRDRDYILEA
AVDLRDYLQT EVSPRMDQFL FGDLLRLGTA DNGHVTDFDL FIATEYGGWS LWREGRRLDS
HVLEALRGHG RVVLQDNGVQ AVYEHLRRVD ADGAETDSLI TLVAYDRSGQ ERLLMSSVGF
ALLLAVVLGV LAFLVARVIM QRSLLRPVLQ IVSRLDDVSR GEFRRLPTTG VSELDVITRG
VNTMLERIDD REERLLEAKH QLERRVQERT AALESLNQQL AHLATTDPLT GLANRRSFFE
AAERELGRSR RAGYATVVAM LDLDHFKDVN DTHGHAAGDR ILELVSRVLV KELRDADLVG
RLGGEEFGLL LVDVSVAHAR EIVERIRTRV MHCDTGLDLS VTLSAGIADC DPAMLGLDVA
MALADRALYE AKRQGRNRVI TRAIGSPS
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