| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2575 |
|---|
| Symbol | |
|---|
| ID | 7315672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2717751 |
|---|
| End bp | 2719007 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643617477 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002514638 |
|---|
| Protein GI | 220935739 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3174] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.612396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC TTGCACCCTT CTACACACTC GCCATCTCGC TGGCCTTGGG GTTGCTGATC
GGCCTTGAGC GTGGCTGGCA TGAACGCGAA CAGGCCGAAG GGCACCGGGT CGCCGGGATA
CGCACCTATG CCCTCATCGG CCTGCTGGGC GGAGTCTGGG GCCTGTTGTC ACAGGAACTC
GGGAATCTCC TGCTGGCCAT TGCCTTCACG GCCGTGGCCG TTGTGCTGGT CGCCGCCCAT
GCCATCAGCC AGCGCGAGGA TCCGGATATC GGCATCACCG GTGTCATCGC CGGTCTGCTC
ACATTCGCCT TCGGCGCCAT GGCAACACTC GACCTGATTG CCCCTGCGGC CGCCGGCGCG
GTGGTCACGA CCCTGTTGCT GGGCATCAAG CCGACACTCC ACGACTGGGT TGCCCGGCTG
GAGCGCAGGG AACTGCTCGC GACACTCAAG CTGCTGCTCA TCTCCGTGGT AATCCTGCCC
CTGCTGCCGA ACGAAGGCTA CGGCCCCTGG TCGTCACTCA ATCCGTATCG GATCTGGTGG
ATGGTGGTGA TCATCGCGAG CATCTCCTTT GCCGGTTATT TCGCCATGAA GATCATCGGC
GAACGCAAGG GTATCCTGTT CACCGGGCTG TTCGCGGGCC TGGCTTCGTC CACCGCCGTC
ACACTCAATT TCTCCCGTCT GGCCAAACAA ACCAAAAACA AGGAGAACGT CTTGGCGGCA
GGCATCCTGG TCGCCTGCGC CACCATGTTC CCGCGCATCC TCGTGGTCAG CGGTATCTTC
AGCTGGACGC TGGCAACGAC ACTGCTGGCC CCCGTTCTCG CCATGGCATT GGTGACCTAT
ACCGCCGCAT GGCTATTCTG GCGCCGGGGA GAAGATAGCG CCTCCAGTGG CGAGACCCGC
CTGAAGAACC CCTTCGAACT CAGGCCTGCG CTGAGCTTCG CGGCGTTGCT GGTACTGATC
ATGCTGCTGT CCAGGGCGCT GTCGGATCAA TTCGGCGACC TGGGTATCTA CCTGCTGGCC
GCCTTCTCCG GGGCCTCGGA TGTGGATGCC ATCACCCTGT CGCTGGCCGA CATGGCCGGC
ACCGACCTGA ACACCTCAAC CGCGGCGCTG GCCATTCTGA TCGCCAGCTT CAGCAACTCG
ATGATCAAGG CAGGTGTGTC GTTGGGCATC GGCGGGACAG CCCTGGGTGC ACGGGTCGGG
CTGAGCCTGC TCACGGCGGT GATTGTCGGC TATGCCGCCT GGTGGTTTGT TTCCTGA
|
|---|
| Protein sequence | MDELAPFYTL AISLALGLLI GLERGWHERE QAEGHRVAGI RTYALIGLLG GVWGLLSQEL
GNLLLAIAFT AVAVVLVAAH AISQREDPDI GITGVIAGLL TFAFGAMATL DLIAPAAAGA
VVTTLLLGIK PTLHDWVARL ERRELLATLK LLLISVVILP LLPNEGYGPW SSLNPYRIWW
MVVIIASISF AGYFAMKIIG ERKGILFTGL FAGLASSTAV TLNFSRLAKQ TKNKENVLAA
GILVACATMF PRILVVSGIF SWTLATTLLA PVLAMALVTY TAAWLFWRRG EDSASSGETR
LKNPFELRPA LSFAALLVLI MLLSRALSDQ FGDLGIYLLA AFSGASDVDA ITLSLADMAG
TDLNTSTAAL AILIASFSNS MIKAGVSLGI GGTALGARVG LSLLTAVIVG YAAWWFVS
|
|---|
| |