| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2569 |
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| Symbol | |
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| ID | 7315666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2711322 |
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| End bp | 2712851 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643617471 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_002514632 |
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| Protein GI | 220935733 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.393427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAC CCGTTGATCA CACTGTCCTG CAGGCCATCG CCAACGGCGT CGCCGCCGAG
ACCGGCGAGG CCTTCTTCGA CGCCCTGGTC CAGCACCTGG CCGGCGCCCT CAATGTGCAA
TCCGCCTGGG TCACCGAATG GCACCCGGAA GCATCACGCC TGCGCGCCCT GTCCTTCTGG
TCCAGGGGCC GATTTGTGCC CGACTACGAG TACCCCATCC ACGGCACCCC CTGTGAAGCG
GTGATCAGCG GGCAACGTCT GGTGGTGGTG CCGGAGCGGG TGGTGGAACT CTACCCGGAT
GACCCGGACC TGCCCGGCCA GGACGCGGTG AGCTACATGG GCATGCCCCT GCGCGATACG
GACGGCACGG TGCTCGGCAA CCTGGCCGTG CTGGACAGCC GGCCCCTTGA GGCGGATGCC
ACCTGCCAGG CGGTGTTCGG CATCTTCGGC GCCCGGGCGG CCGCGGAACT GGCCCGCCTG
CGCCGGGACC GCAGGCTGCG CGCGCTCAAC GACGAGGCCG CCGCCCTGCG CGCGGAGCTG
GGCAGCCTGC GCGGCTTCGA GGAGATCCTC GGCGAGAGCG CCGCCCTGCG GCGCCTGCTG
GCGGACATCG GGCGCGTCGC CCCCAGCGAG GCCACGGTGC TGATCACCGG CGAGACCGGC
ACCGGCAAGG AACTCATCGC CCGGGCCATT CATCGCCACA GCCGGCGCAG TCAGGGACCG
CTCATCAAGG TGAACTGCGC CGCCATCACC GCCACGCTGC AGGAGAGCGA ATTCTTCGGT
CACGAGAAAG GCGCCTTCAC CGGTGCCGCC CAGCGCCGGG ACGGACGCTT CAAGCTGGCC
GACGGCGGCA CCCTGTTCCT GGACGAGGTG GGCGAGATGC CCCTGGACCT GCAGGCCAAG
CTCCTGCGGG TGCTGCAGGA GGGTGAGTTC GAGCCGGTGG GCAGCGGGCG CACCGTGCGG
GTGGACGTGC GCGTGATCGC CGCCACCCAC CGGGATCTGA CGCAGATGGT GCGCGAGGGC
GGTTTCCGCG AGGACCTGCT CTACCGGCTC AACGTGTTTC CCCTGCATGC GCCGCCGCTG
CGGGAGCGGG GCGAGGACGT GGTGCTGCTC GCCGAGGCCA TCGCCACGCG CCTGGCACGC
CAGGAGGGTG CGACCCTCGC GCCGCTCTCC CCGGCGGACC GCGCCCGACT CAAGGCCCAC
CCCTGGCCCG GCAACGTACG GGAACTGGAG AACGTCATTG AACGGGCCTG GATCACCGGC
ACCGACACCC CGGACGGACG CGTGCTGAAC CTGGTACGGG CACTGCCGGG CTCGGAGGTC
ACGCCCCGCA CCCCCGGCCT CGCGGCCGAT CCCGACGCGG TGTTCACCGC CGCCGAGATG
CTGCAGATGG AGCGCAGCAA CATCGAGCGC GCCCTGGTCA GCTGCCAGTG GAAACTCTCC
GGGGTGGGCG GTGCGGCGCG GCTGCTGGGC CTGCATCCCA ACACCCTGGC CTCGCGCATG
AAGTCCCTGG GCATCCGGCG CCCCGACTGA
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| Protein sequence | MSAPVDHTVL QAIANGVAAE TGEAFFDALV QHLAGALNVQ SAWVTEWHPE ASRLRALSFW
SRGRFVPDYE YPIHGTPCEA VISGQRLVVV PERVVELYPD DPDLPGQDAV SYMGMPLRDT
DGTVLGNLAV LDSRPLEADA TCQAVFGIFG ARAAAELARL RRDRRLRALN DEAAALRAEL
GSLRGFEEIL GESAALRRLL ADIGRVAPSE ATVLITGETG TGKELIARAI HRHSRRSQGP
LIKVNCAAIT ATLQESEFFG HEKGAFTGAA QRRDGRFKLA DGGTLFLDEV GEMPLDLQAK
LLRVLQEGEF EPVGSGRTVR VDVRVIAATH RDLTQMVREG GFREDLLYRL NVFPLHAPPL
RERGEDVVLL AEAIATRLAR QEGATLAPLS PADRARLKAH PWPGNVRELE NVIERAWITG
TDTPDGRVLN LVRALPGSEV TPRTPGLAAD PDAVFTAAEM LQMERSNIER ALVSCQWKLS
GVGGAARLLG LHPNTLASRM KSLGIRRPD
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