| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2462 |
|---|
| Symbol | |
|---|
| ID | 7318179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2613145 |
|---|
| End bp | 2614692 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643617366 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_002514527 |
|---|
| Protein GI | 220935628 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC CTGTTGAACT CAGCCTGTTC GCCAGCCGGG TGGACTCCAT CTGCGGCGAG
ATGGGCGTGC AGCTGGCCCA GGCGGCCTTC TCGCCCAACA TCCGCGACCG GCTGGATTTC
TCCTGCGCCC TGTTCGACGC AGACGGCGGG CTGTGCGCCC AGGCGGCCCA CATCCCGGTG
CACCTGGGTA GCATGGCCTA TGCCATGGCC GACATCGTCG CGGGGCTTGA ATGGGCGCCG
GGCGACATGG TGATGCTCAA CGATCCCTTC CTGGGCGGCA CCCACCTGCC GGATGTGACC
GTGGTGGCGC CCCTGTTCGC GGGGGATGCA CTGGTGGCCT TCGTGGCCAA CCGTGCCCAC
CACGCGGACA TCGGCGGCGA GGCGCCGGGT TCCATGCCCC TGTCCCGCAG CCTGATGGAG
GAGGGTATCC TGATCCCGCC CGGGCACATC GTGCGGGGCG GTGCGCTGAA CCGGGCACGG
CTCGCCGAGA TCACCGCCGC CACCCGCAAT CCCCGGGACG CAGAGGGGGA TTTCGCCGCC
CAGATCAGTG CCAACCGCCG GGGTCTGGAA CGCCTCGCTG CCCTGGTCGA GTCCCTGGGT
GTAGAAGCTT GGTCGCAGGC CGTGTCTCAG CTCAACGACT ACGGCGCGCG CCTGGCACGC
AGCGCCCTGG CGGCCATCCC CGAGGGTCGC TTCGAGTTCG AGGATTGCAT GGACGACGAC
GGACTCGGTC ACGCGGACAT CCCCATCCGG GTGGCCATCG AGCGTCACGG CGAGGACCTG
CGGGTGGACT TCACCGGCAC CGCGCCCCAG GTCCAGGGCA ACATCAACTG CCCCCTGTCG
GTGACCGCCG CCGGCGTGTT CTATGCCCTG CGCTGCCTCA TGCCGCCCCA GACCCCCGCC
TGCGCCGGCA CCTTCAGCCC CATCCATCTT TCGGTTCCCG AGGGCAGCTT GCTCAACGCC
CTGCGACCTG CGGCGGTGGC GGCCGGCAAC GTGGAGACCA GCACCCGGGT GGTGGACGTG
GTGCTCGGCG CGCTGGCACA CGCCCTGCCG GATCGCATCC CCGCCGCCAG TCACGGCAGC
ATGAACAACG TCGCCATGGG TTATGGCGGC AAGCATCCCT GGGGTTACTA CGAGACCCTG
GGCGGCGGCA TGGGCGCCGG CCGCAACGGC GGCGGACTGT CCGCCGTGCA GACCCACATG
ACCAACACCC GCAACACGCC CATCGAGGTG CTGGAGAGCC GCTACCCGTT ACGGGTGCGC
CGCTACGCCC TTAGACGCTG CTCCGGCGGG CAGGGCGCCC GTCCCGGCGG TGACGGCCTG
ATCCGCAGCT ACGAGTTCCT GGCCCCCGCC CACGTGACCC TGCTCACCGA GCGCCGCCGC
CACGCCCCCT GGGGCCTCGA CGGCGGTGGT GACGGAGCGC CCGGCATCAA CCGCCTCAAC
GACGAGATCC TCCCCGGCAA GGTCAGCCGC GAAGTGCAGC CAGGCGACGT GCTCACCATC
GAGACCCCGG GTGGGGGTGC CTTTGGCACA GTGGCTAGTG GCAAGTAG
|
|---|
| Protein sequence | MLDPVELSLF ASRVDSICGE MGVQLAQAAF SPNIRDRLDF SCALFDADGG LCAQAAHIPV
HLGSMAYAMA DIVAGLEWAP GDMVMLNDPF LGGTHLPDVT VVAPLFAGDA LVAFVANRAH
HADIGGEAPG SMPLSRSLME EGILIPPGHI VRGGALNRAR LAEITAATRN PRDAEGDFAA
QISANRRGLE RLAALVESLG VEAWSQAVSQ LNDYGARLAR SALAAIPEGR FEFEDCMDDD
GLGHADIPIR VAIERHGEDL RVDFTGTAPQ VQGNINCPLS VTAAGVFYAL RCLMPPQTPA
CAGTFSPIHL SVPEGSLLNA LRPAAVAAGN VETSTRVVDV VLGALAHALP DRIPAASHGS
MNNVAMGYGG KHPWGYYETL GGGMGAGRNG GGLSAVQTHM TNTRNTPIEV LESRYPLRVR
RYALRRCSGG QGARPGGDGL IRSYEFLAPA HVTLLTERRR HAPWGLDGGG DGAPGINRLN
DEILPGKVSR EVQPGDVLTI ETPGGGAFGT VASGK
|
|---|
| |