Gene Tgr7_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2454 
Symbol 
ID7317156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2601457 
End bp2603196 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content67% 
IMG OID643617358 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_002514519 
Protein GI220935620 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.154303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGG TGGTTGAGAT CAAGGTGCCG GACATCGGCG ATTTCAAGGG CGTGGAGATC 
ATCGACGTCC TGGTGAAACC CGGTGACAAG GTCAAGCCGG AAGACCCGCT CATCACCCTG
GAATCCGAGA AGGCCAGCAT CGACATCCCC GCGCCCCAGG CCGGCAAGGT CAAGGGGCTC
AAGGTGAAGA AGGGCGGCAA GGTCTCCCAG GGCGACGCCA TCCTGGATCT GGAGGTGGAC
GAGGCCGAGG CGGCCAAGCC CGCCGACAAG TCTGCCAAGT CCGAAGCCAA GGCACCGGCG
GCCAAGGCCT CGGCCACCGC CCCCGGCGAC GCCGACATCA ACTGCCAGCT ACTGGTACTG
GGTTCCGGTC CTGGCGGCTA CACCGCCGCC TTCCGCGCCG CAGACCTGGG CCTGGACGTG
GTCATGGTGG AGCGTTACGC CGAGATCGGC GGCGTGTGCC TGAACGTGGG CTGCATCCCC
TCCAAGGCCC TGCTGCATGC GGGCCAGGTG ATTGAGGAGG CCGAGGCCTT TGCCGAGCAC
GGCATCACTT TCGGCAAGCC CAGGATCGAC CTCAAGAAAC TGGCCAGCTA CAAGGACGGC
GTGGTGGGCA AGCTCACCGG CGGCCTCAAG CAGCTGGCCA AGCAGCGCAA GGTGCGCGTG
GTCCATGGCA CGGGGCAGTT CTCCTCTGCC AACACCCTCA CGGTGGAGGG CAAGGACGGC
ACGCAGGTGA TCGGTTTCGA GCAGGCCATC ATCGCCGCCG GCTCCCAGGC GGTGAAGCTG
CCCGGCTTCC CTTGGGACGA CGAACGCGTC ATGGATTCCA CCGACGCCCT GATGCTCAAA
GACGTGCCCA AGCGCCTGCT GGTGGTGGGC GGCGGCATCA TCGGCCTGGA AATGGCCTGT
GTCTACGACG CCCTGGGCGC CAAGGTGACG GTCTGCGAAC TGTCCAACGA GCTCATGCCC
GGCGCCGACC GCGATCTGGT GCGGCCGCTG GAGAAGCGCA TCAAGGGCCG CTACGAGGCC
ATCTACACCG GCACCAAGGT GGCCAGGGCC GAGGCCACCA GGCAGGGCAT CAAGGTGAGC
TTCGAGGGCG GCAAGGCCCC GGAGACAGAC ACCTTCGACC GGGTGCTGGT GGCCGTGGGC
CGCAGCCCCA ACGGCAAGAA GATCAATGCC GAGGCCGCAG GCGTGCAGGT GGATGAGCGC
GGTTTCATCA ACGTGGACAA GCAGCAGCGC ACCAACGTGG CCCACATCTT CGCCATCGGC
GACATCGTCG GCCAGCCCAT GCTGGCCCAC AAGGCGGCCC ATGAGGGCAA GGTGGCCGCC
GAGGTCGCCG CCGGCGAGAA GTCCCACTTC GACGCCCGGG CCATCCCCTC CGTGGCCTAC
ACCCACCCGG AGGTGGCCTG GATGGGCATC ACCGAGACCG AGGCCAAGGC CCAGGGCATC
GAGTACACCA AGGGCGTGTT CCCCTGGGCC GCCAGCGGCC GGGCCATCAG CGTGGGCGGC
GACAGCGGCC TGACCAAGCT GCTGTTCGAC GAACACGGCC GGGTGATGGG CGCCGGCATC
GTCGGCCCCA ACGCTGGCGA GCTGATCGGC GAGACGGTGC TGGCCCTGGA GATGGGTGCC
GACATGGAAG ACATCGGCCT GACCGTGCAC CCCCACCCGA CCCTGTCCGA AACCATCTGC
TTCGCCGCTG AGGTGGCCCA CGGCAGCGTC ACGGACATCA TGGCGCCCAA GCGGAAGTAG
 
Protein sequence
MGKVVEIKVP DIGDFKGVEI IDVLVKPGDK VKPEDPLITL ESEKASIDIP APQAGKVKGL 
KVKKGGKVSQ GDAILDLEVD EAEAAKPADK SAKSEAKAPA AKASATAPGD ADINCQLLVL
GSGPGGYTAA FRAADLGLDV VMVERYAEIG GVCLNVGCIP SKALLHAGQV IEEAEAFAEH
GITFGKPRID LKKLASYKDG VVGKLTGGLK QLAKQRKVRV VHGTGQFSSA NTLTVEGKDG
TQVIGFEQAI IAAGSQAVKL PGFPWDDERV MDSTDALMLK DVPKRLLVVG GGIIGLEMAC
VYDALGAKVT VCELSNELMP GADRDLVRPL EKRIKGRYEA IYTGTKVARA EATRQGIKVS
FEGGKAPETD TFDRVLVAVG RSPNGKKINA EAAGVQVDER GFINVDKQQR TNVAHIFAIG
DIVGQPMLAH KAAHEGKVAA EVAAGEKSHF DARAIPSVAY THPEVAWMGI TETEAKAQGI
EYTKGVFPWA ASGRAISVGG DSGLTKLLFD EHGRVMGAGI VGPNAGELIG ETVLALEMGA
DMEDIGLTVH PHPTLSETIC FAAEVAHGSV TDIMAPKRK