| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2453 |
|---|
| Symbol | |
|---|
| ID | 7317155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2600396 |
|---|
| End bp | 2601238 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643617357 |
|---|
| Product | sodium-type flagellar protein MotY, putative |
|---|
| Protein accession | YP_002514518 |
|---|
| Protein GI | 220935619 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.230815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGAC TTATGGCGAT CCTCATGCTG TTTGCCGCCG CGCCCGCCTG GGCGGGGGTG
GAGTTCGGCG CGCGCCTGGA GCAGTCCTTC TGGACGGTCA GCAGCGCGCC GGATGCCTGC
GAACTGCGCC ACGAGATCCC CCGCTACGGG GTGGCGCGCT TCCAGGAGCG GGCCGGCCAC
GAGCTGGGAT TCAGGCTGGA TACCGATCTC TCCGGCGCCT CGGGCCGAGA GGCGCGGCTG
GTGCTGGTGC CGCCCAACTG GCGTCATGAC CTGCGTCCCC GGCACCTGGC GGACGTGGGC
TCCGAGGCCC GGACCCTGAG CCTGGACAGG GCCACCACCC TGGAACTCTT TCACGCCCTG
GAGGCCGGCT ACCAGCTGAG CGTGGAGCAT CCGTCCCCCG GGGCCGGCGG CTTCCAGGTG
GCGGCGGCGG TCTCCACGGT GCGTTTCCGG GATGTGCAGG CGGAATTCAG CCGTTGCCGG
GCCGGCATGA TCCAGCTGGA TTTCCGGCCG GTGGCCGAGT GGCGGGTGCA TTTTGACACC
AACCTGAGCC GCCTGGATGC CCGGGCCCAC GAGACCCTGC GTGAGGTCCT CACCGCCTGG
CGCGCCCAGC GCCACATGCG GGTGATCGTG GCCGGTCATG CCGACGTGCG CGGTGGCGAC
ACCATCAATG ACCCCCTGTC CCGGCGTCGC GCCGAGGCGG TGCGTACCTT CCTGGATGTC
TACGGCATCC CCCGCAACCG CATCGAGCTG CGTTCCTTCG GCGCCACCTG GCCCCTGGAC
CCGGGCGAGG GCGAGGCCGC CTGGGCCCTG AACCGCCGCG CGACGGTCTG GCTGGCGCCA
TAG
|
|---|
| Protein sequence | MARLMAILML FAAAPAWAGV EFGARLEQSF WTVSSAPDAC ELRHEIPRYG VARFQERAGH
ELGFRLDTDL SGASGREARL VLVPPNWRHD LRPRHLADVG SEARTLSLDR ATTLELFHAL
EAGYQLSVEH PSPGAGGFQV AAAVSTVRFR DVQAEFSRCR AGMIQLDFRP VAEWRVHFDT
NLSRLDARAH ETLREVLTAW RAQRHMRVIV AGHADVRGGD TINDPLSRRR AEAVRTFLDV
YGIPRNRIEL RSFGATWPLD PGEGEAAWAL NRRATVWLAP
|
|---|
| |