| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2447 |
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| Symbol | |
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| ID | 7317149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2592879 |
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| End bp | 2594240 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643617351 |
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| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
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| Protein accession | YP_002514512 |
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| Protein GI | 220935613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGCACA TACACATCCT CGGCATCTGC GGCACCTTCA TGGGCGGCAT CGCCCTGCTG
GCCCGGGCCG CCGGCTACCG GGTCACCGGC TCCGATCAGA ACGTCTACCC GCCCATGAGC
ACCCTGCTGG CGGAGCAGGG CATCGATGTC TCCCAGGGCT TCGATCCCGC CCACTTGGAT
CCCGCACCGG ACCAGGTGGT GATCGGCAAT GTCATGAGCC GGGGCAACCC GGCGGTGGAG
TACGTGCTTA ACCGCGGGCT TGCTTACACC TCGGGTCCCC AGTGGCTGGC CGAGCACGTG
CTCAAGGACC GCTGGGTCCT GGCGGTGGCC GGCACCCATG GCAAGACCAC CACTTCGAGC
ATGCTGGCCT GGATCCTGGA GTACGCGGGT CTCAGGCCCG GCTTCCTGAT CGGCGGTGTG
CCGGAGAACT TCGGCGTCTC CGCGCGCCTG GGCGAGGCGC CGTTCTTCGT GGTGGAGGCC
GATGAGTACG ACACCGCGTT CTTCGACAAG CGTTCCAAGT TCGTCCACTA CCGCCCGCGC
ACCCTGGTGC TCAATAACCT GGAATACGAC CACGCGGACA TTTTTCCGGA CCTTGCTGCC
ATCGAGCGCC AGTTCCATCA CCTGGTGCGC ACCGTGCCCG GCGAGGGCCT GATCGTGCGC
AACGCTGATG ACGAGAACCT GAGCCGGGTA CTGTCCCAGG GCTGCTGGAC GCCGGTGCAG
GGTTTCAGTG TGGCGGGTCA TGGTGACTGG CAGGGGCGGC CGCAAAGTCC CGATGCCAGC
CGTTTCCAGG TGCTTTACCG GGGTGAGTCT CAGGGTGAGG TCTGTTGGGA AATGATCGGC
CGCCACAACA TGGCCAACGC CCTGGCGGCC TTGGCCGCCG CACGCCACGC CGGGGTGCCG
GTGCCACAAG GCATCCATGC CCTGGCCAAG TTTCAGAGCG TCAAGCGGCG TCTGCAGCTG
CGCGGCGAGC GTTCGGGCAT CCAGGTCTAC GACGACTTCG CTCACCATCC TACCGCCATC
GCCACGACCC TGGAGGCTCT GCGCGCCCGG GTGGGCGCGG CGCGTATCAT CGCCGTGCTG
GATCCGCGCT CCAACACCAT GCGCATGGGC GTGCATCGCG ACCGCCTGGC CGGGTCGCTG
GCGGCCGCCG ACCGGGTGTT CCTGCACGCC CCGGCGGACC TGGGCTGGGA CAGCCAGGTG
GTGATCGATG CCTTGCCCCA TGGTCTGGCC TGTGCGGACA CCGATGCCCT GCTGGCCGCG
TTGCTCGCCG AGGTGCGCCC CGGCGACCAC GTGCTCATCA TGAGCAACGG CGGTTTCGGC
GGCCTGCATG ACCGGCTGCT GGCCGCCCTG TCCGGACCGT AG
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| Protein sequence | MRHIHILGIC GTFMGGIALL ARAAGYRVTG SDQNVYPPMS TLLAEQGIDV SQGFDPAHLD
PAPDQVVIGN VMSRGNPAVE YVLNRGLAYT SGPQWLAEHV LKDRWVLAVA GTHGKTTTSS
MLAWILEYAG LRPGFLIGGV PENFGVSARL GEAPFFVVEA DEYDTAFFDK RSKFVHYRPR
TLVLNNLEYD HADIFPDLAA IERQFHHLVR TVPGEGLIVR NADDENLSRV LSQGCWTPVQ
GFSVAGHGDW QGRPQSPDAS RFQVLYRGES QGEVCWEMIG RHNMANALAA LAAARHAGVP
VPQGIHALAK FQSVKRRLQL RGERSGIQVY DDFAHHPTAI ATTLEALRAR VGAARIIAVL
DPRSNTMRMG VHRDRLAGSL AAADRVFLHA PADLGWDSQV VIDALPHGLA CADTDALLAA
LLAEVRPGDH VLIMSNGGFG GLHDRLLAAL SGP
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