| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2425 |
|---|
| Symbol | |
|---|
| ID | 7317127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2567248 |
|---|
| End bp | 2568162 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643617329 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_002514490 |
|---|
| Protein GI | 220935591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCAG TCACCAGCCA GATGGCGGCA CTGATCGTCT GCGGGGTCCT GTGGCGTCTG
CTGCAGCCGG CCGGCCTGGA CGCGGACACC ACCCGCCGGG TGCTCACCAA CGTGGTCTAT
CACCTGCTGC TGCCGGCCCT GGTGCTGCTG GTCATGTGGC GCGCGCCCCT GGGGCTGGAT
TCGGTGCGCA TCGCGGTGGT GGCGGGCAGC TCCGTGCTGG TGGCCATGCT GGTCATCTGG
GGCGGTTGCC GGGTCTGCGG CCAGTCCCGG GCCATCACCG GCGCCATGAT CCTGGCCGCC
GCGTTCCCCA ACGCCGTCTA CCTGGGCCTG CCGGTGCTGG AGAGCCTGTT CGGCGAGACC
GGCCGTTCCA TTGCCATCCA GTTCGACCTG TTCGCCTGTC TGCCCCTGCT GCTCACCGTG
GGCGCCCTGG TGGCACGCCA TTTCGGCGAA CCCGGTGATG CCCTGCATCC CATCTCAAGC
CTGATCCGGG TGCCGGCTAT CTGGGCGGGA CTCACCGGCA TGGCCTTCAA CCTCGGCGGC
GTGCCCCTGA TCCCCTGGCT GGACACCTGG CTCACCATGC TGGCCAACGG CGTGGCGCCG
CTGATGCTGT TCTCCCTGGG CCTGGCCCTG TGCATCCGCA ACTGGCGCAT GAGCTACGTG
GCGGTGCTGA TCCCCGTGGT GGCGGTGCAG CTGTTCTTAA TGCCCCTGTG GGCCTGGGGC
CTGGCCAGCG GCATCGGCCT GGAAGGAGAA CTGCTGGTGG GCACGGTGCT GGAGGCGGCC
ATGCCCAGCA TGGTGCTGGG TCTGGTGTTC TGCGATCGCT ACCGTCTGGA CACCTCCGTG
TACGCGGCTG CGGTGACGGT GACCACGGCA CTGGCGCTGG TGACGCTTCC GCTGTGGTAC
GGCTGGGTCA GTTGA
|
|---|
| Protein sequence | MFAVTSQMAA LIVCGVLWRL LQPAGLDADT TRRVLTNVVY HLLLPALVLL VMWRAPLGLD
SVRIAVVAGS SVLVAMLVIW GGCRVCGQSR AITGAMILAA AFPNAVYLGL PVLESLFGET
GRSIAIQFDL FACLPLLLTV GALVARHFGE PGDALHPISS LIRVPAIWAG LTGMAFNLGG
VPLIPWLDTW LTMLANGVAP LMLFSLGLAL CIRNWRMSYV AVLIPVVAVQ LFLMPLWAWG
LASGIGLEGE LLVGTVLEAA MPSMVLGLVF CDRYRLDTSV YAAAVTVTTA LALVTLPLWY
GWVS
|
|---|
| |