Gene Tgr7_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2409 
Symbol 
ID7317111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2554613 
End bp2555071 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID643617313 
Productcell shape determination protein CcmA 
Protein accessionYP_002514474 
Protein GI220935575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0441319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGGAA ATCGCAAAAA GATGAGTTCC GCCCAGGTGG ACACCCTGGT GGGGCGCAAC 
ACCGTCGTGG AGGGCAACAT GCGCTTCTCC GGGGGCCTGC ACGTGGAGGG CACCATCCGC 
GGCAATCTCT ACGCCGATGA CGGCGAGCGT CCCTCCATCC TGATCCTCAA CGAAGGCGGT 
CGGATCGAGG GGGAGGTCAA TGTCCCCCGG GTGGTGATCA ACGGTACCGT GGAAGGCGAT 
GTGCATGCCA GCGAGCGGGT GGAACTGGCA CCCAAGGCGA GGATCAGCGG CAGCGTGTAT 
TACAATCTGA TCGAGATGGC CATGGGCGCC GAGGTGAACG GCAACCTGAT CCGCCGGTCC 
AACGACAAGC CCCGACTCGA ATACCTCAAA CCCGAGGAGG GTTCCGCAGC GACGGCGGGC 
AACGCCCCCA CGGGCGGGGC AGGCAAGGCG AATTCTTGA
 
Protein sequence
MWGNRKKMSS AQVDTLVGRN TVVEGNMRFS GGLHVEGTIR GNLYADDGER PSILILNEGG 
RIEGEVNVPR VVINGTVEGD VHASERVELA PKARISGSVY YNLIEMAMGA EVNGNLIRRS 
NDKPRLEYLK PEEGSAATAG NAPTGGAGKA NS