Gene Tgr7_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2396 
Symbol 
ID7317092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2533543 
End bp2534826 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content57% 
IMG OID643617294 
ProductType II secretory pathway component ExeA (predicted ATPase)-like protein 
Protein accessionYP_002514461 
Protein GI220935562 
COG category[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1716] FOG: FHA domain
[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTTG AATTCTTCAA CCTGGACAGG CCGCCGTTTC AACTCGCGCC TGATTCGGGC 
TTTCTCTACA TGAGCAAGCC CCATGCTCGG GCGCTGGCAT ACATGAAGTA CACAGTACTC
AATCGGGACG GTTTCGCGGT CGTTACCGGG GAAATCGGTT CGGGCAAGAC TATCGTTCTG
GAGCGGTTGC TGGACTCCCT GGATGACTCG GTGACTGTCG CCCGGATCCA CCAGACCCAA
CTCTCCGAGG TGGAGTTTCT CCAGCACCTG GCCACCATAC TCGGGATCAA GTCACCCCAG
GGTACCAAGG TCGAGCTGAT TGAGAAGCTC AATCGGTACC TGGCCGATCA GGGCCGGCGG
CGCCGTAGTG TGTTGCTGGT GGTGGATGAG TCGCAGAATC TGGGAGTTAC TGCGCTGGAG
GAGATTCGTT TGCTCAGCGA TGGCGAATCA TCCCGCAACA AGGTGCTCAG TGTCATTCTG
GTGGGGCAGC CGGAACTGGC CGACCGGCTT GACGACCCTG TCCTGGAGCA GCTTGAGCAG
CGTATCCGTT TGCGATTCCA TCTTCGGCCA CTGAATGTGG GCGAGATCGG GGAGTATATT
CGCCATCGAC TGGAGGTCGC GGGGTGGCAG GGCGCTGATC TGTTTGATGA TCATGCTGTG
GAACTTATAC ACCACTATAC CGGTGGTATT CCCCGCCTGA TTAACGTCTT GTGTGACACG
GTCTTGCTTG CCGCTTTCAT TGAGGAAACC AGGGAAGTAT CACGCGAGCT CGTCGAGTCG
TCCATTGAGG AGCTTCAATG GGTGCCTTTC GAGCAGAGGC GTGCGATTCT CCCTGTGACG
GAGGAAGCAG AGACTGTATC TTCCGAGGCT ATAAGGCCAG CTGCCGCCAC TGGTGCCAGA
CTGGTCGTGA GCCTCAAAGA CCGGGTGCTC TCAACTCATA TGCTCACCGA GCCAGTGGAG
AGCATTGGGC GCATTACCGA TAACCGTATC CAACTGGCCC ACATGTCCGT CAGCCGGCAT
CATGCAGCGA TACTCCATGT GGACCAGCAC TTTTATCTAG TTGATTTCAA CAGCTTGAAT
GGTGTCAAGG TTAACGGGGA ACCTGTTGTC CGGCATCAAC TCAGGGATGG GGATCGGATA
GGTGTTGGCT GCTACCAGAT GACATTCCAT CTGGCTGCCG GCATCACGGT CCCGCGCAAC
AGCGTGCAAG AAGACACCAT TACCGCCGAG CGAGGTTTCC CAGATCGACT GCAACAGACC
CGGGTGAGTT CCTCCCCCAG CTGA
 
Protein sequence
MYLEFFNLDR PPFQLAPDSG FLYMSKPHAR ALAYMKYTVL NRDGFAVVTG EIGSGKTIVL 
ERLLDSLDDS VTVARIHQTQ LSEVEFLQHL ATILGIKSPQ GTKVELIEKL NRYLADQGRR
RRSVLLVVDE SQNLGVTALE EIRLLSDGES SRNKVLSVIL VGQPELADRL DDPVLEQLEQ
RIRLRFHLRP LNVGEIGEYI RHRLEVAGWQ GADLFDDHAV ELIHHYTGGI PRLINVLCDT
VLLAAFIEET REVSRELVES SIEELQWVPF EQRRAILPVT EEAETVSSEA IRPAAATGAR
LVVSLKDRVL STHMLTEPVE SIGRITDNRI QLAHMSVSRH HAAILHVDQH FYLVDFNSLN
GVKVNGEPVV RHQLRDGDRI GVGCYQMTFH LAAGITVPRN SVQEDTITAE RGFPDRLQQT
RVSSSPS