| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2396 |
|---|
| Symbol | |
|---|
| ID | 7317092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2533543 |
|---|
| End bp | 2534826 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643617294 |
|---|
| Product | Type II secretory pathway component ExeA (predicted ATPase)-like protein |
|---|
| Protein accession | YP_002514461 |
|---|
| Protein GI | 220935562 |
|---|
| COG category | [T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1716] FOG: FHA domain
[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTTG AATTCTTCAA CCTGGACAGG CCGCCGTTTC AACTCGCGCC TGATTCGGGC
TTTCTCTACA TGAGCAAGCC CCATGCTCGG GCGCTGGCAT ACATGAAGTA CACAGTACTC
AATCGGGACG GTTTCGCGGT CGTTACCGGG GAAATCGGTT CGGGCAAGAC TATCGTTCTG
GAGCGGTTGC TGGACTCCCT GGATGACTCG GTGACTGTCG CCCGGATCCA CCAGACCCAA
CTCTCCGAGG TGGAGTTTCT CCAGCACCTG GCCACCATAC TCGGGATCAA GTCACCCCAG
GGTACCAAGG TCGAGCTGAT TGAGAAGCTC AATCGGTACC TGGCCGATCA GGGCCGGCGG
CGCCGTAGTG TGTTGCTGGT GGTGGATGAG TCGCAGAATC TGGGAGTTAC TGCGCTGGAG
GAGATTCGTT TGCTCAGCGA TGGCGAATCA TCCCGCAACA AGGTGCTCAG TGTCATTCTG
GTGGGGCAGC CGGAACTGGC CGACCGGCTT GACGACCCTG TCCTGGAGCA GCTTGAGCAG
CGTATCCGTT TGCGATTCCA TCTTCGGCCA CTGAATGTGG GCGAGATCGG GGAGTATATT
CGCCATCGAC TGGAGGTCGC GGGGTGGCAG GGCGCTGATC TGTTTGATGA TCATGCTGTG
GAACTTATAC ACCACTATAC CGGTGGTATT CCCCGCCTGA TTAACGTCTT GTGTGACACG
GTCTTGCTTG CCGCTTTCAT TGAGGAAACC AGGGAAGTAT CACGCGAGCT CGTCGAGTCG
TCCATTGAGG AGCTTCAATG GGTGCCTTTC GAGCAGAGGC GTGCGATTCT CCCTGTGACG
GAGGAAGCAG AGACTGTATC TTCCGAGGCT ATAAGGCCAG CTGCCGCCAC TGGTGCCAGA
CTGGTCGTGA GCCTCAAAGA CCGGGTGCTC TCAACTCATA TGCTCACCGA GCCAGTGGAG
AGCATTGGGC GCATTACCGA TAACCGTATC CAACTGGCCC ACATGTCCGT CAGCCGGCAT
CATGCAGCGA TACTCCATGT GGACCAGCAC TTTTATCTAG TTGATTTCAA CAGCTTGAAT
GGTGTCAAGG TTAACGGGGA ACCTGTTGTC CGGCATCAAC TCAGGGATGG GGATCGGATA
GGTGTTGGCT GCTACCAGAT GACATTCCAT CTGGCTGCCG GCATCACGGT CCCGCGCAAC
AGCGTGCAAG AAGACACCAT TACCGCCGAG CGAGGTTTCC CAGATCGACT GCAACAGACC
CGGGTGAGTT CCTCCCCCAG CTGA
|
|---|
| Protein sequence | MYLEFFNLDR PPFQLAPDSG FLYMSKPHAR ALAYMKYTVL NRDGFAVVTG EIGSGKTIVL
ERLLDSLDDS VTVARIHQTQ LSEVEFLQHL ATILGIKSPQ GTKVELIEKL NRYLADQGRR
RRSVLLVVDE SQNLGVTALE EIRLLSDGES SRNKVLSVIL VGQPELADRL DDPVLEQLEQ
RIRLRFHLRP LNVGEIGEYI RHRLEVAGWQ GADLFDDHAV ELIHHYTGGI PRLINVLCDT
VLLAAFIEET REVSRELVES SIEELQWVPF EQRRAILPVT EEAETVSSEA IRPAAATGAR
LVVSLKDRVL STHMLTEPVE SIGRITDNRI QLAHMSVSRH HAAILHVDQH FYLVDFNSLN
GVKVNGEPVV RHQLRDGDRI GVGCYQMTFH LAAGITVPRN SVQEDTITAE RGFPDRLQQT
RVSSSPS
|
|---|
| |