| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2392 |
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| Symbol | |
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| ID | 7317088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2527057 |
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| End bp | 2527689 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643617290 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_002514457 |
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| Protein GI | 220935558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGT CAATGTATGT GAGTAAGTGG CTGCGCTGGA GTGGTCTGGT GCTGGTTGTG
ATGTTGTTGG GTGCTTGTGC GGCGGGACCT GATGTGCCCT TGAGCGAGGC GCCGGCTGCA
CAGGCGGAAC CCCGCTATAC CATCGGGCCC GGTGACCAGC TCAACGTTTT TGTCTGGGGT
AACCCGGACC TGACCGTGAC AGTGCCGGTC CGACCCGATG GCAGGATCAC GACGCCTCTG
GTGGAAGATG TTCAGGCCAG TGGCAAGACG CCCACGGAAC TTGCCCGGGA CATCGAGCAA
AGTCTGGCCC ACTATGTACA GAACCCGATT GTAACCGTGA CGGTCACCAA TTTTGTGGGC
ACCTCTACCG AACAGATCCG GGTGATCGGT CAGGCCGTAC AGCCCCGTTC CATTCCCTAC
CGTGTGGGCA TGACCGTGCT GGACGTGATC ATCGAGGTGG GAGGGCTCAC AGAGTTCGCC
GCAGGCAACC GGGCGACCAT TATCCGGGGG CCAACGGGGG CGCAGCAGGC ATTTCGCGTC
CGATTGTCGG ATCTTGTGAC ACGGGGTGAT ATCTCAGCCA ATGTACCCAT GCAGCCGGGC
GACGTCCTGA TCATTCCGGA ATCCTGGTTC TGA
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| Protein sequence | MLKSMYVSKW LRWSGLVLVV MLLGACAAGP DVPLSEAPAA QAEPRYTIGP GDQLNVFVWG
NPDLTVTVPV RPDGRITTPL VEDVQASGKT PTELARDIEQ SLAHYVQNPI VTVTVTNFVG
TSTEQIRVIG QAVQPRSIPY RVGMTVLDVI IEVGGLTEFA AGNRATIIRG PTGAQQAFRV
RLSDLVTRGD ISANVPMQPG DVLIIPESWF
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