| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2388 |
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| Symbol | |
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| ID | 7316245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2522174 |
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| End bp | 2523088 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617286 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_002514453 |
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| Protein GI | 220935554 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTTT CGTCCAGCAG CGGGCACATT GTCAACGCCA TGACCGTCGA TGTGGAGGAC
TACTTCCACG TCTCCGCCTT CGCCGATGCC ATCGACCGCG CCGACTGGCA TGACATGCCG
TCCCGGGTGG TGGCCAATAC CCATCGCCTG CTGGACCTGT TCGACGGACA GGGTGTGAAG
TCCACCTTCT TCGTGCTGGG CTGGGTGGCT GAGCGGGAGC CGGGGCTGGT ACGCGAGATC
GTCGAGCGCG GGCACGAGCT GGCCTGCCAC GGCTACAGCC ACCAGCTGGT CTACAACCAG
ACGCCTGAAC TGTTCCGGGA GGAGACCTTC CGCTCCAAGG ATCTCCTGGA GCAGGCGGGC
CAGGTGCCCG TGCGCGGCTA TCGCGCGGCC AGCTACTCCA TCACCCGCCG CTCCCAGTGG
GCCCTGGATA TCCTGGGCGA GGCCGGTTTT GAGTACGACT CCAGCATCTT CCCGGTGCGT
CACGATCGCT ATGGCATCCC GGGCGCCGGT CGTTGGCCCC ACGAGATGAC CCTCAATGAA
GGCCGGCGCC TGGTGGAGTT CCCCCTCTCC ACGGTGCGCT GGGCCGGCAT GACCCTGCCC
ATGGCCGGCG GTGGTTATTT CCGGCTCTAC CCCTATGCCC TGAGCCGGGC CGGTTTTCGC
AACATCAACC AGGGCGCCGG CAAACCCTTC GTGTTCTACC TGCACCCTTG GGAGGTGGAC
CCCGGGCAGC CGCGCATCAA GGCCAAGGCC CTGTCGCGGT TTCGGCACTA CAACAACCTG
CACCGCTGTG AATCCAGGTT GCGCAGGCTG TTAAATGATT TCCGTTTCGC CCCCATGCGC
GACGTGCTGG CGTCCATGGA GCTGGTGCCT GGCGAATCTT CGGCGCCCGT GGGCGCTGCG
ACCGCCCAGG GCTGA
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| Protein sequence | MSVSSSSGHI VNAMTVDVED YFHVSAFADA IDRADWHDMP SRVVANTHRL LDLFDGQGVK
STFFVLGWVA EREPGLVREI VERGHELACH GYSHQLVYNQ TPELFREETF RSKDLLEQAG
QVPVRGYRAA SYSITRRSQW ALDILGEAGF EYDSSIFPVR HDRYGIPGAG RWPHEMTLNE
GRRLVEFPLS TVRWAGMTLP MAGGGYFRLY PYALSRAGFR NINQGAGKPF VFYLHPWEVD
PGQPRIKAKA LSRFRHYNNL HRCESRLRRL LNDFRFAPMR DVLASMELVP GESSAPVGAA
TAQG
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