| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2349 |
|---|
| Symbol | |
|---|
| ID | 7318138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2472136 |
|---|
| End bp | 2473497 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643617248 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002514415 |
|---|
| Protein GI | 220935516 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG CTGACACGCG TCCGACTTTG CTGGTTGTTG AAGATGATCC AGGGTTGCTG
GGGCAGCTTC GCTGGTGTTT CGAGGATTTC GAGGTGGCGA CGGCGACCAC GCGCGACGAG
GCCATTGCCC AACTGCGTCG ATCGGAGCCG TCTGTGGTGA CCCTTGATCT GGGGCTGCCG
CCCGACCCCG GAGGCGCCAG TGAAGGGATC GCCACGCTGG AGCAGATTCT GACGCTTGCT
CCAGATACCA AGGTCATCGT GGTCACCGGC AACAGTGATC GGGAGAACGC GGTCAAGGCC
GTGGGTCTGG GGGCCTATGA TTTCTATCAG AAGCCGGTCG ATGCGGATCT TCTGAACCTG
ATCGTCAAGC GCGCCCAGCG CCTGTACGAG TTGGAGCGCG AGAATCGCAG GCTTCGGGAG
AACCAGGGGG TGTCGCCTCT GCCGGGGCTG ATTGCGGCAA GCCCGGAGAT GCTCAGGGTG
TGTCGGGTTA CCGAAAAGGT GGCACCGACA GATGTGACGA CGCTGTTGCT CGGCGAAAGC
GGCACCGGCA AGGAAGTGAT CGCCCGTGCG ATTCATGCCC TGAGTCCCCG GAGCGATTTC
CGCTTCGTGG CCATCAATTG TGCGGCGATC CCGGACAATC TGCTGGAGTC CGAGTTGTTC
GGCTACGAGA AGGGGGCCTT CACCGGCGCG GTCAAGCAGA CCCGGGGCAA GATTGAATAC
GCCGATGGCG GCACCCTGTT CCTGGACGAG GTGGGCGATC TGCCGCTGCC CTTGCAGGCC
AAGCTGCTGA GATTTCTCCA GGAGCGGGTG GTTGAGCGGG TGGGTGGCCG GGAGGAGATT
CCCGTGGATG TGCGCGTGGT CTGCGCGACC CACCAGGATC TCTCGGCGCT GATCCAGGAG
GGGCGTTTCA GGGAAGATCT GTATTACCGC ATCAGTGAGA TGACCATCAG TATTCCACCC
ATCCGGGACC GGAGTGGGGA CACCCATCTC CTGGCCCGTG CCCTGCTGGA GCGCTACGCA
AGAGAGCAGG GGCGGCCTTT GAAGGGTTTC ACGCCCGAGG CGCTCAAGGC CATGGAGCGC
CATACCTGGC CCGGCAACGT GCGCGAACTG GAGAACCGCG TGAAGCGGGC GGTGATCATG
GCGGAGGGTA ATCAGATCAA TGTCGAGGAC CTGGAGCTTT CGCCCGAGGG TGAGGATCCG
TTGATGCTCA ACCTGCGCCA GGTGCGCGAC GAGGCCGAGG CTCGCGCTCT GCGCCGCACG
CTGCAGATCG TGGACGGCAA TATCTCCCGG GCCGCCGAGC TGTTGGGGGT GAGCCGACCG
ACGCTGTATG ACCTGTTGAA GAAGCATGAT CTGAATCGGT AG
|
|---|
| Protein sequence | MAEADTRPTL LVVEDDPGLL GQLRWCFEDF EVATATTRDE AIAQLRRSEP SVVTLDLGLP
PDPGGASEGI ATLEQILTLA PDTKVIVVTG NSDRENAVKA VGLGAYDFYQ KPVDADLLNL
IVKRAQRLYE LERENRRLRE NQGVSPLPGL IAASPEMLRV CRVTEKVAPT DVTTLLLGES
GTGKEVIARA IHALSPRSDF RFVAINCAAI PDNLLESELF GYEKGAFTGA VKQTRGKIEY
ADGGTLFLDE VGDLPLPLQA KLLRFLQERV VERVGGREEI PVDVRVVCAT HQDLSALIQE
GRFREDLYYR ISEMTISIPP IRDRSGDTHL LARALLERYA REQGRPLKGF TPEALKAMER
HTWPGNVREL ENRVKRAVIM AEGNQINVED LELSPEGEDP LMLNLRQVRD EAEARALRRT
LQIVDGNISR AAELLGVSRP TLYDLLKKHD LNR
|
|---|
| |