Gene Tgr7_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2343 
Symbol 
ID7318132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp2467252 
End bp2467821 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID643617242 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002514409 
Protein GI220935510 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA TAGAGACAAC ACTACCGGGC GTCCTGTTGA TCGAGCCCCG GGTATTCGGG 
GACGAACGCG GTTTTTTCAT GGAAACCTAT CAGGCATCCC GTTACGCCGA AGCCGGTATA 
GCGGGTCCCT TTGTCCAGGA CAATCTGTCA CTGTCCAGAC ACGGCATTCT CAGAGGCCTT 
CACCTGCAAC ATCCGGGTGC TCAGGGGAAA CTCGTTTCAG TCCTGAAGGG CGAAGTGTTC 
GACGTGGCCG TCGACGTACG TACAGATTCA CCCACGTTCG GGCAATGGGT GGGGGAATAC 
CTCTCCGAAA CAAACAAACG CCAGCTCTGG GTGCCCGAGG GTTTCGCCCA CGGATTCTGC 
GTCACCAGTG ATGAGGCCCT GTTCGCCTAC AAATGCACCC GCCTCTATTC GCCACAGACC 
GAGATCAGCA TCCGCTGGGA CGATCCGGCC ATCGGCATTC AATGGCCTGT TGATGCACCG 
GCTCTGTCCC AGAAGGACCA GGCAGGCCTG TTTCTGGCCG ACATAGCCCC GGACCAGCTT 
CCTGCCTATA TGTCAGAGAC CACATCATGA
 
Protein sequence
MNVIETTLPG VLLIEPRVFG DERGFFMETY QASRYAEAGI AGPFVQDNLS LSRHGILRGL 
HLQHPGAQGK LVSVLKGEVF DVAVDVRTDS PTFGQWVGEY LSETNKRQLW VPEGFAHGFC 
VTSDEALFAY KCTRLYSPQT EISIRWDDPA IGIQWPVDAP ALSQKDQAGL FLADIAPDQL 
PAYMSETTS