Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2338 |
Symbol | |
ID | 7318124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2460733 |
End bp | 2461923 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643617235 |
Product | elongation factor Tu |
Protein accession | YP_002514405 |
Protein GI | 220935506 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0567224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAGG AAAAATTTGA GCGTAAGAAG CCGCATGTAA ACGTGGGCAC CATTGGTCAC GTGGACCATG GCAAGACGAC GCTGACGGCG GCGCTGACGG TGTGTCAGGC GAAGAAGTTT GGTGGTGAGG CCCGTGCCTA CGACCAGATT GACAACGCCC CTGAAGAGCG CGCCCGCGGC ATCACGATCG CCACCGCGCA CGTGGAGTAC GAGTCCGCCA ACCGCCACTA CGCACACGTG GACTGCCCCG GCCACGCCGA CTACGTGAAG AACATGATCA CCGGTGCTGC CCAGATGGAT GGCGCGATCC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CCCAGACCCG CGAGCACATC CTGCTGGCCC GTCAGGTGGG CGTGCCCTAC ATCGTCGTGT TCCTGAACAA GGCCGACATG GTGGACGACC CCGAGCTGTT GGAGTTGGTG GAGATGGAGG TCCGTGACCT GCTGTCCTCC TACGACTTCC CTGGCGACGA CACCCCGATC ATCGTGGGTT CCGCGCTGAA GGCGCTGGAA GGCGACGAGT CCGAGATCGG CGTGCCGGCC ATCGACAAGC TGATCGAGGC GCTGGACACC TACATTCCTG AGCCCGAGCG TGCCATCGAC GGTGCGTTCC TGATGCCGGT GGAAGACGTG TTCTCCATCT CTGGTCGCGG CACCGTGGTG ACCGGCCGAA TCGAGCGCGG CATTGTGAAG GTGGGTGACG AAATCGAGAT CGTGGGTATC CGCGACACCG TCAAGACCAC CGTGACCGGC GTGGAGATGT TCCGCAAGCT GCTGGACCAG GGTCAGGCGG GCGACAACGT GGGCGTGCTG CTGCGCGGCA CCAAGCGTGA CGACGTGGAG CGTGGCCAGG TGCTGTGCAA GCCCGGTTCG ATCACCCCGC ACACCAAGTT CGAGGCTGAG GTGTACGTGC TGTCGAAGGA AGAGGGTGGT CGTCACACCC CGTTCTTCAA CGGCTACCGT CCGCAGTTCT ACTTCCGGAC CACCGACGTG ACCGGATCCT GCGACCTGCC GGAGGGTGTG GAGATGGTGA TGCCTGGTGA CAACGTGAAG ATCACGGTGT CGCTGATCAA CCCGATCGCC ATGGAAGACG GTCTGCGCTT CGCCATCCGC GAAGGCGGCC GCACCGTGGG CGCCGGCGTC GTATCGAAGA TCATTGAGTA G
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Protein sequence | MSKEKFERKK PHVNVGTIGH VDHGKTTLTA ALTVCQAKKF GGEARAYDQI DNAPEERARG ITIATAHVEY ESANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDPELLELV EMEVRDLLSS YDFPGDDTPI IVGSALKALE GDESEIGVPA IDKLIEALDT YIPEPERAID GAFLMPVEDV FSISGRGTVV TGRIERGIVK VGDEIEIVGI RDTVKTTVTG VEMFRKLLDQ GQAGDNVGVL LRGTKRDDVE RGQVLCKPGS ITPHTKFEAE VYVLSKEEGG RHTPFFNGYR PQFYFRTTDV TGSCDLPEGV EMVMPGDNVK ITVSLINPIA MEDGLRFAIR EGGRTVGAGV VSKIIE
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