| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2334 |
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| Symbol | rplA |
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| ID | 7318119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2458325 |
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| End bp | 2459020 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643617230 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002514401 |
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| Protein GI | 220935502 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.505693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGT TGACCAAGCG TATGCGGGCG ATCCGCGAGA AGATCGAAGC CGGCAAGCTG
TACCCCGCCA ACGAGGCCTT CGCGCTGCTG AAGGAGATCT CCTCGGTGAA GTTCGCGGAG
TCCGTGGACG TGAGCGTGAA CCTGGGCGTC GATCCCCGTA AGTCCGACCA GGTGGTGCGC
GGTTCCACCG TGCTGCCCAA CGGCACCGGC AAGACCGTGC GTGTGGCCGT GTTCACCCAG
GGCGCCAACG CCGAGGCCGC CAAGGCCGCC GGTGCCGATA TCGTCGGCAT GGACGATCTG
GCCGCCGAGG TGAAGAAAGG CAACATGGAC TTCGACGTTG TCATCGCGAC CCCCGACGCC
ATGCGCGTGG TGGGCCAGCT GGGCCAGATC CTTGGTCCCC GCGGCCTGAT GCCTAACCCC
AAGGTTGGCA CCGTGACCAC CGATGTGGCC ACCGCGGTGA AGAATGCCAA GGGCGGTCAG
GTGCGCTACC GCACCGACAA GGCCGGCATC ATTCATTGCT CCATCGGCAA GGTGGGTTTC
GAGCCCGACG CGCTGAAGGA AAACCTCAAT GCCCTGCTGG CTGACCTGCA GAAGGCCAAG
CCTTCCGCCG CCAAGGGTGT TTACATGAAG AAGGTGACCG TCTCCACCAC CATGGGGCCG
GGCATCGCCG TGGATCAGGC CAGCCTGTCT GCCTGA
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| Protein sequence | MAKLTKRMRA IREKIEAGKL YPANEAFALL KEISSVKFAE SVDVSVNLGV DPRKSDQVVR
GSTVLPNGTG KTVRVAVFTQ GANAEAAKAA GADIVGMDDL AAEVKKGNMD FDVVIATPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTTDVA TAVKNAKGGQ VRYRTDKAGI IHCSIGKVGF
EPDALKENLN ALLADLQKAK PSAAKGVYMK KVTVSTTMGP GIAVDQASLS A
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