| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2333 |
|---|
| Symbol | rplJ |
|---|
| ID | 7318118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2457516 |
|---|
| End bp | 2458046 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643617229 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_002514400 |
|---|
| Protein GI | 220935501 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.275074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCACTGA ATCTCGAAGA CAAGAAAGCA ATTGTCTCCG AAGTGGCTGC GGTGGCTGCG
AGTGCTCATT CCGCGGTGGC AGCAGAATAC CGCGGTCTGA CCGTCACAGA GATGACCGAG
CTGCGTGCCA AGGCACGTCA GTCCAACGTC TATCTGCGGG TGGTCAAGAA CTCTCTGGCC
CGTCGCGCGG TTGAAGGTAC CGATTTCGCC TGCATGCAGG AAGGCCTCGT GGGACCCCTG
GTCCTGGCCT TCTCGCAGGA TGATCCCGGT GCCGCCGCCC GTCTGGTCAA GGATTTCGCC
AAGGAGCACA AAAAGCTCGA GGTCAAGCTG GTGTCCGTGG GTGGACAGCT GCTCGGCCCC
GGTGAGCTTG AGCGGCTGGC CAGCATGCCC ACCCGCGACC AGGCGATCAG CTTGCTGATG
GCCGTGATGA AGGCGCCGCT CGACAAGTTC GCGCGCACCC TCAACGAGGT CCCGGGCAAG
CTGGTTCGCA CCGTCGCCGC CATTCGCGAC CAGAAACAGG CTAGCGCCTG A
|
|---|
| Protein sequence | MPLNLEDKKA IVSEVAAVAA SAHSAVAAEY RGLTVTEMTE LRAKARQSNV YLRVVKNSLA
RRAVEGTDFA CMQEGLVGPL VLAFSQDDPG AAARLVKDFA KEHKKLEVKL VSVGGQLLGP
GELERLASMP TRDQAISLLM AVMKAPLDKF ARTLNEVPGK LVRTVAAIRD QKQASA
|
|---|
| |