| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2325 |
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| Symbol | rpsJ |
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| ID | 7318110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2443845 |
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| End bp | 2444156 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643617221 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002514392 |
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| Protein GI | 220935493 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000023421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCAAGC AGAGAATCCG TATCCGGCTC AAGGCCTTCG ATCACCGTCT GATCGATCGC
TCCGCCAGTG AGATCGTCGA AACCGCCAAG CGCACCGGCG CCCGGGTCAA GGGTCCCATC
CCCCTGCCCA CCAAGATGGA GCGCTTCACG GTCCTGATCT CGCCCCACGT GAACAAGGAC
GCCCGTGATC AGTATGAGAT CCGCACCCAC AAGCGGCTCA TGGACATCAT GGACCCCACG
GACAAGACCG TGGACGCCCT GATGAAGCTG GATCTGGCCG CCGGTGTGGA CGTGCAAATT
AAGCTTAACT AA
|
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| Protein sequence | MSKQRIRIRL KAFDHRLIDR SASEIVETAK RTGARVKGPI PLPTKMERFT VLISPHVNKD
ARDQYEIRTH KRLMDIMDPT DKTVDALMKL DLAAGVDVQI KLN
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