| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2315 |
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| Symbol | rpsQ |
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| ID | 7317564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2439104 |
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| End bp | 2439367 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643617211 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_002514382 |
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| Protein GI | 220935483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0524873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAG AAGCAAAAGT ACAGCGTGCG GTCATCGGTC GCGTCGTCAG CGACAAGATG
GACAAGACCC GTACCATCCT CATCGAGCGC AAGGTGCGTC ACCCGCTGTA CGGCAAGTAC
ATCCGGCGTT CCACCAAGCT GCACGTTCAC GATGAGGGCA ACGAGGCCCG CATGGGTGAC
AAGGTGATGG TGCAGGAGTG CCGCCCCATG TCCAAGACCA AGACCTTCCG CCTGGTGAAG
GTGCTGGAGA AGGCCGCCGG CTGA
|
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| Protein sequence | MSEEAKVQRA VIGRVVSDKM DKTRTILIER KVRHPLYGKY IRRSTKLHVH DEGNEARMGD
KVMVQECRPM SKTKTFRLVK VLEKAAG
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