| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2304 |
|---|
| Symbol | secY |
|---|
| ID | 7317553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2433669 |
|---|
| End bp | 2435024 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643617200 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_002514371 |
|---|
| Protein GI | 220935472 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAACC CGCGCGCAGG CATGGCTGGC TCGCTGGGCG GGATCGGCAA GCTGACTGAA
CTCCGGCAGC GTCTGGTCTT CGTGCTGCTG GCCCTGGTGG TGTACCGGAT CGGGACCTTC
ATCCCGGTGC CGGGCATCAA CCCTGTGGCC ATGGCGCAGT TTTTCGACCA GCACAGCGGC
ACCATCCTGG ACATGTTCAA CATGTTCTCC GGTGGCGCCC TGGAGCGGCT GAGCATCTTC
GCCCTGGGCG TGATGCCCTA CATCTCCGCT GCCATTATCA TGCAGCTGCT CAGCGCCACG
GTGCCGAGCC TGCAGCAGTT GAAGAAGGAA GGCGAGGCCG GCCGCCGCAA GATCACCCAG
TACACCCGTT ACGGGACTGT GGCCCTTGCG CTGTTCCAGA GTATCGGTAT TGCCATCGCC
CTGAACGGCC AGCAGATCGG CGGCATGAGC ATGGCCATCG CACCGGGGCC CGGTTTTATC
TTCACCACGG TGGTGACCCT GGTGACGGGT ACCATGTTCC TGATGTGGCT GGGTGAGCAG
ATCACCGAGC GGGGTATCGG CAACGGTATC TCCATCATCA TCTTTGCGGG CATCGTGGCG
GGCCTGCCGG CCGCCATTGG TGGCACCCTG GAACTGGCCC GCACCGGCGA GCTGTCCCCG
GCCTTCGTGA TGCTGCTCAT CATCATGGCC CTGGCAGTGA CGGCCTTCGT GGTGTTCGTG
GAGCGTGGCC AGCGGCGCAT TACCGTGAAC TACGCCAAGC GCCAGGTGGG CCGCAAGGTG
TATGGCGGGC AGAGCAGCCA TCTGCCCCTG AAGCTGAACA TGGCGGGTGT GATTCCCCCC
ATCTTCGCTT CGAGTATTAT CCTGTTCCCG GCGACGCTGG GAACCTGGTT CGGCCAGGCC
GAAGGGATGA CCTGGCTGCG TGACATCTCG ACCACGCTGG CCCCGGGTCA GCCGCTGTAC
GTGATGTTCT ATGCGGCTGC GATCATCTTC TTCTGCTTTT TCTACACCGC GCTGGTGTTC
AATTCGCGGG AGACGGCCGA CAACCTGAAA AAGTCCGGGG CGTTCATCCC CGGCATCCGT
CCAGGGATGC AGACGGAGCG TTACATCGAT GGTGTCATGA CCCGGTTGAC CGCGGTGGGT
GCGATCTACA TCACCGCCGT GTGTCTGCTC CCCGAGTTCA TGATCCTGTA CTGGAATGTG
CCATTCTACT TCGGCGGCAC GTCCCTGCTG ATCATCGTGA TTGTGGTCAT GGATTTCATG
GCCCAGCTTC AGGCCCACCT GATGTCCCAT CAGTACGAAG GGCTCATGAA GAAGGCGAAC
CTGAAGGGTT ATGGTAAATC GGGCATGCTG CGCTGA
|
|---|
| Protein sequence | MANPRAGMAG SLGGIGKLTE LRQRLVFVLL ALVVYRIGTF IPVPGINPVA MAQFFDQHSG
TILDMFNMFS GGALERLSIF ALGVMPYISA AIIMQLLSAT VPSLQQLKKE GEAGRRKITQ
YTRYGTVALA LFQSIGIAIA LNGQQIGGMS MAIAPGPGFI FTTVVTLVTG TMFLMWLGEQ
ITERGIGNGI SIIIFAGIVA GLPAAIGGTL ELARTGELSP AFVMLLIIMA LAVTAFVVFV
ERGQRRITVN YAKRQVGRKV YGGQSSHLPL KLNMAGVIPP IFASSIILFP ATLGTWFGQA
EGMTWLRDIS TTLAPGQPLY VMFYAAAIIF FCFFYTALVF NSRETADNLK KSGAFIPGIR
PGMQTERYID GVMTRLTAVG AIYITAVCLL PEFMILYWNV PFYFGGTSLL IIVIVVMDFM
AQLQAHLMSH QYEGLMKKAN LKGYGKSGML R
|
|---|
| |