| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2300 |
|---|
| Symbol | |
|---|
| ID | 7317549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2432049 |
|---|
| End bp | 2432669 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643617196 |
|---|
| Product | 30S ribosomal protein S4 |
|---|
| Protein accession | YP_002514367 |
|---|
| Protein GI | 220935468 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.50143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAT ACATTGGTCC CAAGTGCAAA CTGAGCCGCC GGGAAGGCAC CGACCTTTTT
CTGAAAGGCC GCGGCCGCTC CCTCGACACC AAGTGCAAGC TGGACAAGGC CCCTGGCCAG
CACGGCGATC GCCGTGCCCG CCTGTCCGAC TACGGCCTGC AGCTGCGCGA GAAGCAGAAG
CTGCGCCGCA TCTATGGTGT GCTGGAGCGC CAGTTCCGCA ACTACTACAA GACTGCCTCC
CGCATGAAGG GCTCCACGGG TGAGAACCTG CTGCAGCTGC TGGAGCGTCG TCTGGACAAC
GTGGTCTACC GCATGGGCTT TGGCGCCACC CGCGCCGAGG CACGCCAGCT GGTCAGCCAC
AAGGCCATCC AGGTCAACGG CCAGGCGGTG AACATCGCCT CCTACCAGGT CCAGCCCTCC
GACGTGGTGG CTGTCCGCGA GAAGGCCAAG AAGCAGGTGC GCATCCAGGA TTCCCTGACG
CTCGCCGAGC AGTTCGGCTT CCCCGAGTGG GTCGAAGTGG ACACCAAGAA AATGGAAGGC
GTCTTCAAGA GCATTCCGGA ACGTAGCGAA CTGCCAGCCG AGATCAATGA GTCTCTGGTG
GTGGAGCTCT ACTCCAAGTA A
|
|---|
| Protein sequence | MARYIGPKCK LSRREGTDLF LKGRGRSLDT KCKLDKAPGQ HGDRRARLSD YGLQLREKQK
LRRIYGVLER QFRNYYKTAS RMKGSTGENL LQLLERRLDN VVYRMGFGAT RAEARQLVSH
KAIQVNGQAV NIASYQVQPS DVVAVREKAK KQVRIQDSLT LAEQFGFPEW VEVDTKKMEG
VFKSIPERSE LPAEINESLV VELYSK
|
|---|
| |