Gene Tgr7_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2296 
Symbol 
ID7317545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp2429021 
End bp2429608 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content58% 
IMG OID643617192 
Productprotein of unknown function DUF1555 
Protein accessionYP_002514363 
Protein GI220935464 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.67081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCACAC GTAACTGGAC GCTCTCTCTT GTGATGCTGG TGCTGCTTGC ATTTAGTGGT 
AATGCACAGT CCTTTGAGCT CACACCCGAT GACATGATAG AACGCTATTA TCACCCGTCG 
GGGCAGTGTG CCGGGGAGGC CGCTCAGGCC GGGTGCATTG CCGATGTGTT CGGTCTGGAG 
GACGGTAGCA GCCTTAGTCT GCTGTACCGC TCCGACTTCG GTGGTAGCGA TAGTGGCGAA 
CTCGCCTCCT CCTACACCAC AACCTTCTTC CCAGAAGCGG GCGATCCCTA CAACGCCTAC 
ATCAGATGGG AAGGCCCGGA TCTTATCTCC TGTCCTGAGT GTTACCTGGT GGTCAAGGAT 
GGAAACACCA ACCCCAACTA CTACTTCTAC GCGTTCGAGG TCGGGGACTG GGATGGTATG 
GAGACTATCA GCCTGCTCGG GTTCTGGGAG GAGACCCGAG GTGCGATCTC TCATGTTTCC 
ATCTATGGTG GTAAGCCCGT CGGTGTACCC GAGCCTGGCC CGCTGGCCCT GCTTGGTATC 
GGTCTCCTGG CCATGACCAT GGCAGCCCGC CGCCGCCGAA ACAACTGA
 
Protein sequence
MCTRNWTLSL VMLVLLAFSG NAQSFELTPD DMIERYYHPS GQCAGEAAQA GCIADVFGLE 
DGSSLSLLYR SDFGGSDSGE LASSYTTTFF PEAGDPYNAY IRWEGPDLIS CPECYLVVKD 
GNTNPNYYFY AFEVGDWDGM ETISLLGFWE ETRGAISHVS IYGGKPVGVP EPGPLALLGI 
GLLAMTMAAR RRRNN