Gene Tgr7_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2292 
Symbol 
ID7317541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2421248 
End bp2422609 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content66% 
IMG OID643617188 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_002514359 
Protein GI220935460 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA AGGTATACAT CCAGACCCAC GGTTGTCAGA TGAACGAGTA CGACTCCGGC 
AAGATGCTGG ACGTGCTGCG TGAGTCCGAG GGCATGGTGC TGACCGATGA CCCGGAGCAG
GCGGATGTGC TGCTGCTCAA CACCTGCTCC ATCCGCGAAA AGGCCCAGGA GAAGGTGTTC
TCCCTGCTGG GCCGCTGGCG TGCCCTGAAA GAGGCCCGCC CGGGGGTGGT GATCGGCGTG
GGCGGCTGCG TGGCCAGCCA GGAAGGCGAG GCCCTGCGCG AACGGGCGCC CTTCGTGGAC
GTGGTGTTCG GCCCCCAGAC CCTGCACCGG TTGCCGGAGA TGGTGCGTTC GGCGCGCCTC
AAGGGCCTGC CGGTGGTGGA CATCTCCTTC CCGGAGATCG AGAAGTTCGA CCGCCTGCCC
GAGCCCCGGG CCGAGGGCCC CTCGGCCTTC GTGTCCATCA TGGAAGGCTG CTCCAAGTAC
TGCACCTTCT GCGTGGTGCC CTACACCCGG GGCGAGGAGA TCAGCCGGCC CTTCGACGAC
GTGCTCGCCG AGGTGGCCCA GCTGGCCGCC CAGGGGGTGC GCGAGATCAA CCTGCTGGGG
CAGAACGTCA ACGCCTACCG GGGCCCCATG CACGACGGCG AGATCGCCGA CCTGGCCCTG
CTGATCCACT ACGTGGCGGC GGTGGACGGC ATCGAGCGCA TCCGCTTTAC CACCTCCCAC
CCGGTGGAGT TCTCCGACAG CCTGATCCGG GCCTTCGCCG AGGTGCCGGA GCTGGTGAGC
CACGTGCACC TGCCGGTGCA GAGCGGTTCC GACCGCATCC TGGCCGCCAT GAAGCGCGGC
CACACGGCGC TGGAATACAA GTCCAAGATC CGCCGCCTGC GGGAGGCCCG TCCGGACATC
TCCCTGTCCT CGGACTTCAT CGTCGGCTTC CCCGGCGAGA CCGATGCCGA TTTCGAGGCC
ACCATGGAAC TGATCGAGCA GGTGGGCTTC GACCAGTCCT TCAGCTTCAT CTACAGCCGC
CGCCCCGGCA CGCCCGCATC CTCCCTGCCG GACGACGTGC CCCTGGAGGT GAAGAAGGCA
CGCCTGGCGC GTCTTCAGGC GCGCATCAAC GAGATGGCCC AGGCCATCAG CCAGTCCATG
GTGGGCAGCC GTCAGCGCAT CCTGGTGGAA GGTCCGTCGA AGAAGGACCC CGCCCAGATG
GCCGGACGCA CCGCCAACAA CCGAGTGGTC AATTTCGACG GCGCAGCGGA ACTGGCGGGC
CGGTTCGTGG ACGTGCACAT CACGCAGGCG CTGGCCAATT CCCTGAGGGG GCGGCTTGAC
GCCGAATTCA ATATTCAAGA TTCAATATTC AAAGTGGGTT GA
 
Protein sequence
MSSKVYIQTH GCQMNEYDSG KMLDVLRESE GMVLTDDPEQ ADVLLLNTCS IREKAQEKVF 
SLLGRWRALK EARPGVVIGV GGCVASQEGE ALRERAPFVD VVFGPQTLHR LPEMVRSARL
KGLPVVDISF PEIEKFDRLP EPRAEGPSAF VSIMEGCSKY CTFCVVPYTR GEEISRPFDD
VLAEVAQLAA QGVREINLLG QNVNAYRGPM HDGEIADLAL LIHYVAAVDG IERIRFTTSH
PVEFSDSLIR AFAEVPELVS HVHLPVQSGS DRILAAMKRG HTALEYKSKI RRLREARPDI
SLSSDFIVGF PGETDADFEA TMELIEQVGF DQSFSFIYSR RPGTPASSLP DDVPLEVKKA
RLARLQARIN EMAQAISQSM VGSRQRILVE GPSKKDPAQM AGRTANNRVV NFDGAAELAG
RFVDVHITQA LANSLRGRLD AEFNIQDSIF KVG