| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2270 |
|---|
| Symbol | |
|---|
| ID | 7317519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2393514 |
|---|
| End bp | 2397428 |
|---|
| Gene Length | 3915 bp |
|---|
| Protein Length | 1304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643617166 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_002514337 |
|---|
| Protein GI | 220935438 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3164] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGA CGCCACAGCC CCAGGAGCCT GAAAGCCCGC GGCATGATCG TGCCGGGGGT
GTGCGTGTGG CCTGGCGGGG CTGGCTCAGT CGCCTCAAGA CCGCGGCGAT CTGGATCACG
GCCAGCGTAC TGATCCTGCT GGCGGTGCTG GTGACCAGCC TGCGCCTGGT GCTGCCCATG
GCCTCCGAGT ACCGGGAACA GATGGCCGCC GAGCTGGGCG GCCTGTTGGG CCACCGGGTG
GAGATCGGCG CCCTGGATGC CCGCTGGCGC CTGCTGGGTC CACGCATCCT GCTGGACGAC
GTGGCCATCT ACGGCGAGGA CGACACCACC CCGGCCCTCC ATGTGGCGCA GGTGGACGTG
GGTGTGCGTG CCATCCTGAG TCTCTGGCAC CGCCAGCTGC GGGTGCACTC GGTGCGCGTG
CTGGGCGCCG ACGTGCACAT CCACCGGGAC GCGGAGGGCG GTGTCCAAAT CAGTGGCGCG
GGCTTCGCCC CGGCGGCCGG CGAGGCTGCC CCCGCCGCCC CCGGGACCCG GGTGCTGGAC
CTGCTCGCCG GTACCCGCTT CCAGCTCCAG TCCAGCCGCC TGCGCTTCAG CGACGAGATC
CTCACCCTGG ATTACCGCTT CGACGATCTC AACCTCGACG TGGCCGTGGA TGCCGATCGC
CTGCGCCTGG CGGGCCAGGT GTTCCTGCCC AGGGAACTGG GTGCCGCCAT GGCCGTGGGC
CTGGACCTGC GCGGCGACCC CGGGGTGCGC GAGAGCTGGC GCGGCGAATT CTATGTGCAT
GGCGAAGGGG TCATCATCGA AGGGCTCCCG GAACATGCCC TGATGCGTCG CGTGCATGCG
GACTCGGGGG TCCTGGACCT GGAGGTCTGG GGACGTCTGT CAGCGGGCGA ACCGGACCGG
CTGCGTGCCC GGGCCCGTGC CAGGGACCTG CGCTTCAGCC CTGTCTCAGA GGAGGCACCG
GCGCACAGGT TCTCCGAATT GCGCACCGAC CTGCTCTGGG AGCGACGCGG CCGGGGCTGG
CAGCTGCGCC TGCACGATAC CCGCATCGAG GACGGCTCGC CCATGGGGCT GTCCCTGGCC
TTCGCGCCCC GGGACGAAGG TCGCCAGGTC TGGGGCGAAC TGGAGGGTGT GGGTCTTGAG
CGTCTCTCCG TGCTGCTGCT GGCCCAGCCG GCCTTGCTCG AGGAAGACCA GCGCCACCTG
CTCGAACGCC TGGCGCCTAC GGGCGAGATC CGGAAGGCGC GTTTCAATGT CCGCTTGCCC
GTCGAGGAGG ATGCCCGGCC CACGGGGGTG ATGGAGGGCG AGTTCAGCGA ACTGGGCGTG
AATCCCCTGG ACAAGATCCC CGGTTTCCAT GGCCTGGCAG GCAGCTTCAG CCTCCACGAG
GAGGGCGGTG ATGTGACCCT GGCCAGCCGT GGGCTGCGAT TCGAGGCCCC CCGGCTGTTT
GCCGATGCCC TGTGGCTGGA TGGCCTGGAG ACCCGGCTGA AGATCGAGCG CGGCGCGGAC
GGGCTGCATC TGGCCGCCGA CGGGATCCGC GTGCACAACG CCGACATCCG TGCCTGGGGG
CGGGCCGAGG TGGAACTGGG CGAGCGCCCG GGCATGGTGC TGGAGATGGC GTTCGCCGAT
GGTGACGGCA GCCGCACCGC CGCCTATCTG CCGGTGGGCA TCATGCCCCA GAACACCTCA
CGCTGGCTGC GCGAGAGCAT CAAGGCGGGC CGTGTCACCG AGGGCACCGT GGTCTACCGG
GGGCCGTTCA CCCGGCTTCC CTTCGAGGAG GGGGAAGGGG AGTTCGAGGT GCGCGCCCGG
GTGGAGGAGG GCCTGCTGGA CTACCAGCGC GGCTGGCCTG CCATCGACGC CCTGGCGGGA
GAATTGATCT TCACCGACCG GGGCATGCGT GCGCAGTCCG CCAGCGGTCG CCTGTTTGGC
GCGCAGATCC AGGATGCGAC GGTGGTGATC GAGGATTATC ACAACACGGT GCTGCAGATT
CAGGGGCAGG TGGACGGCCC GCTCCAGGAC ATGCTGCGCT ACGTGCGCGA GAGCCCCCTG
GTGCGCGGGC TGGATGACCT GCTGGATCAC TCCCGCGCCC AGGGCGACAG CCACCTGGAT
CTGTCCCTGC GCATCCCCCT GACCCGGCGT GAGGGCGGCA CCGCCAATAC CACCGCCCAG
GGCACGGTGA CCCTCAAGGG CAACCGCCTG ACGCTTACTG GTCATCCGGT GGATTTCACG
GACCTTGAGG GCCAGGTGCG TTTTACCGAG GCCACGGTGA ACGCCGAGGG GGTCAGCGCA
AACCTTCACG GCGAGGCGGT GACGCTCGCG GCGCGCATGC CCAGGGGCGG ACCCCTGACC
GTGGACGGGG AGGGCCTGCA GCGGATCGAG TCCTTCCGTA CGGTGCTGCC CGAACTGCTC
GCGCCCAGAC TCGCGGGTCG GGCCCGCTGG CAGGCCCGCC TGACCGCCCC CCTGGATGGC
GGCGCCACCA CCCTGCGTCT GCAATCGGAC CTGCGGGGTG TCAGCTCGAA CCTGCCCGAG
CCCCTGGCCA AGCCCGCCGC CCGCACCCTG CCCATCACCC TGACCGTGCC GCTGACCCAG
GCCGGTGCGC AGCCCTTGGC CCTGGACCTG GGGCAGCTGC TGTCCATGCG CCTGCGCACG
GCTGCCCCGG GTCGTGCCGC CCGGGGCGAG TTGCGTTTCA ACGACGGCAC GGCACGCATG
CCCGAGCGGG GTGTGCGTCT GGCGGGGCGG ATCGAGGATC TCCCCCTGGA TGACTGGCTG
GCCCTGCGGC AGCGAGTACC GCGCACGGCC GGTGCCCAGG CCGCCCCGGA GCAGCTGGTG
GATCGCCTGG ACGTGCACGT CGGTGCATTG CGCAGCGGCG ACCGGCTGTT CCGCGATCTG
CAGATCCAGG CCGAGCGCAC CCCCCAGCAC TGGGAGGCCC GGGTGGTCTC CGATGCCCTG
CGCGGCCAGC TGGACATTCC CCATGACTTC ACCGGCGCGG CACCCCTGAC CCTGAACCTG
GAGCTGCTGG ACCTGGATCA GCTGGCCGCG GCACGGGAGG GCAGCAGTGC AGGCCAGCCC
GCCCGGCTGG ATCCCCGGGA GCTGCCTGGC ATCCGGGGCA ACGTGGGCGC CCTGGTGCTG
GACGGCCGCT TCTACCGGGA CGTGCGCATC GAGGCGACCC GCATCCGCGA GGGCCTGCAG
ATCCACAGCC TGCAGCTCGC CAGTGCCCGG GACCATGCCC GGATGCGCAT CACCGGCGAC
TGGCGGGTGA GTGGCGCAGA CCGGCACCAG ACCCAGCTGC GTTTCACCAT CGACAGCGAG
AACGTGGGCG AGGCACTCAC GGATCTGGGC TTCGAGCACG GCTTCCACCG CGGCACGGCG
AAGCTGGAAG GCCAGATGCG CTGGCCCGAT GCGACCACCC GATTCACCTG GCAGGGGCTG
ACCGGCAACG TGAAGCTGGA GGTCAAGGAT GGCCGGCTCA CCGAGGTGGA GCCGGGGGCA
GGGCGGTTGC TGGGCCTGTT CAGTCTCAAC ATGATCCCCC GCCGTCTGGC CCTGGACTTC
CGTGATCTCT TCCAGCGCGG ACTCGCCTTC GACCGCATGG AGGGCAACAT CCGCTTCGTG
GACAGCGATG CCTATACCTC GGACCTCACC ATCCAGAGCG CCGCCGCCCG GGTGCAGATC
GAGGGGCGCA CCGGGATCGT GGCCCGGGAT TACGACCAGA AGATCACGGT GATGCCCCGC
GTCGGCAGCA CCCTGCCGGT GGCCGGCGCC ATCCTGGGCG GGCCCGTCGC GGGCGTGGCC
GTGTTCGTCA TGGACCGCCT GCTGGGCATG GGGCGGCGCA TCGACGAGGC CTCCCGGGTG
GAATACCGCA TCACCGGCTC CTGGGATGAA CCCCGGGTGG AGGTGCTGGC CAGGCCCGTG
GAGGAGGTCC AGTAG
|
|---|
| Protein sequence | MSETPQPQEP ESPRHDRAGG VRVAWRGWLS RLKTAAIWIT ASVLILLAVL VTSLRLVLPM
ASEYREQMAA ELGGLLGHRV EIGALDARWR LLGPRILLDD VAIYGEDDTT PALHVAQVDV
GVRAILSLWH RQLRVHSVRV LGADVHIHRD AEGGVQISGA GFAPAAGEAA PAAPGTRVLD
LLAGTRFQLQ SSRLRFSDEI LTLDYRFDDL NLDVAVDADR LRLAGQVFLP RELGAAMAVG
LDLRGDPGVR ESWRGEFYVH GEGVIIEGLP EHALMRRVHA DSGVLDLEVW GRLSAGEPDR
LRARARARDL RFSPVSEEAP AHRFSELRTD LLWERRGRGW QLRLHDTRIE DGSPMGLSLA
FAPRDEGRQV WGELEGVGLE RLSVLLLAQP ALLEEDQRHL LERLAPTGEI RKARFNVRLP
VEEDARPTGV MEGEFSELGV NPLDKIPGFH GLAGSFSLHE EGGDVTLASR GLRFEAPRLF
ADALWLDGLE TRLKIERGAD GLHLAADGIR VHNADIRAWG RAEVELGERP GMVLEMAFAD
GDGSRTAAYL PVGIMPQNTS RWLRESIKAG RVTEGTVVYR GPFTRLPFEE GEGEFEVRAR
VEEGLLDYQR GWPAIDALAG ELIFTDRGMR AQSASGRLFG AQIQDATVVI EDYHNTVLQI
QGQVDGPLQD MLRYVRESPL VRGLDDLLDH SRAQGDSHLD LSLRIPLTRR EGGTANTTAQ
GTVTLKGNRL TLTGHPVDFT DLEGQVRFTE ATVNAEGVSA NLHGEAVTLA ARMPRGGPLT
VDGEGLQRIE SFRTVLPELL APRLAGRARW QARLTAPLDG GATTLRLQSD LRGVSSNLPE
PLAKPAARTL PITLTVPLTQ AGAQPLALDL GQLLSMRLRT AAPGRAARGE LRFNDGTARM
PERGVRLAGR IEDLPLDDWL ALRQRVPRTA GAQAAPEQLV DRLDVHVGAL RSGDRLFRDL
QIQAERTPQH WEARVVSDAL RGQLDIPHDF TGAAPLTLNL ELLDLDQLAA AREGSSAGQP
ARLDPRELPG IRGNVGALVL DGRFYRDVRI EATRIREGLQ IHSLQLASAR DHARMRITGD
WRVSGADRHQ TQLRFTIDSE NVGEALTDLG FEHGFHRGTA KLEGQMRWPD ATTRFTWQGL
TGNVKLEVKD GRLTEVEPGA GRLLGLFSLN MIPRRLALDF RDLFQRGLAF DRMEGNIRFV
DSDAYTSDLT IQSAAARVQI EGRTGIVARD YDQKITVMPR VGSTLPVAGA ILGGPVAGVA
VFVMDRLLGM GRRIDEASRV EYRITGSWDE PRVEVLARPV EEVQ
|
|---|
| |