Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2240 |
Symbol | aspS |
ID | 7317488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2365874 |
End bp | 2367652 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643617136 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002514307 |
Protein GI | 220935408 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAGCC ATTACTGCGG TTCTGTCAAC GAGTCACACT TGGACCAGGA AGTCACCCTG TGCGGATGGG TCAACCGGCG CCGGGACCAC GGCGGCGTGA TCTTCATTGA TCTGCGTGAC CGGGAAGGCC TGGTTCAGGT GGTGTTCGAC CCGGACCTGC CCGAGGTCTT CGCCACCGCC GAGCGGGTGC GCAGCGAATA CGTGCTCAAG GTGAAAGGCC GTGTGCGCCG CCGCCCCGCC GGCACCGAGA ACCCGGACCT GCCCACCGGC GCCATCGAGG TGCTGGGCCG CGAGTTGACG GTGCTCAACA GCGCCGAGAC GCCCCCCTTC CAGCTGGACG AGGACGAGGT CAACGAGGAG ACCCGCCTGC GTTACCGGTA CGTGGACCTG CGCCGGCCAG CGATGCAGAA GCGCCTGCAG ATGCGTGCCC GGGTGTCCCG CACCCTGCGC CGCTTCCTGG AGGACAACGG CTTCCTGGAC ATCGAGACCC CGATGCTCAC CAAGGCCACC CCCGAGGGTG CCCGGGACTA CATCGTGCCC AGCCGCACCC ATCCCGGCAG CTTCTTCGCG CTGCCCCAGT CGCCGCAGCT GTTCAAGCAG CTGCTGATGA TGGGCGGCAT GGACCGCTAC TACCAGATCG TGCGCTGCTT CCGGGACGAG GACCTGCGCG CCGACCGCCA GCCCGAGTTC ACCCAGCTGG ACATCGAGAC CTCCTTCATG GACGAGGAGG GCATCATGGG CCTCATGGAG GAGATGGTGC GCGAGCTGTT CGCCCAGGTG CTGGAAGTGC CCCTGCATAC CCCGTTCCAG CGCATGAGCT ACGCCGAGGC CATGGCCCGT TACGGCTCCG ACAAGCCGGA CCTGCGCATC CCGCTGGAGC TGACCGAGCT CACCGACATC ATGGGCGAGG TGGACTTCAA GGTCTTCTCC GGCCCCGCCA GGGACCCCGC CGGCCGAGTG GCCGCCCTGC GCGTGCCCAA GGGCGGCGAG CTGTCCCGCA AGGACATCGA CGACTACACC CATTTCGTCG GCCGCTACGG TGCCAAGGGC CTGGCCTACA TCAAGGTCAA CGACCTCAAT GCCGGGCGCG AGGGCCTGCA GTCCCCCATC CTCAAGTTCA TGCCCGACAC GGTGGTGGTG GAGATCCTGG GCCGCACCGG CGCCGAGGAC GGCGACCTGA TCTTCTTCGG CGCCGACAAG GCGCGTATCG TGAACGAGGC CCTGGGCGCC CTGCGCGTGA AGCTGGGCCA CGATCTGGGC CTGGTGGAGC GTGGCTGGCG GCCGCTGTGG GTGGTGGACT TCCCCATGTT CGAGCATGAC GAGAAGGAAG GCCGCTGGGT GGCCCTGCAC CACCCCTTCA CCGCTCCCCG CGTCGAGCGT CCCGAGGAAC TCACCGGCAA CCCCGGCGAG ATGATCTCCC GGGCCTACGA CATGGTGCTC AATGGCACCG AGGTGGGCGG CGGTTCCGTG CGTATCCACA CCACCGCCAT GCAGCAGGCC GTGTTCAACC TGCTGGGCAT CGGCGAGGCC GAGGCCCGGG ATAAGTTCGG CTTCCTGCTG GACGCCCTGA AATACGGCTG CCCGCCCCAC GGCGGCATCG CCTTCGGCCT GGACCGTCTG GTCATGCTCA TGACCGGCAG CCAGTCCATC CGCGACGTGA TGGCCTTCCC CAAGACCCAG ACCGCCCACT GCCCGCTCAC GGACGCGCCC GCCGAGGTGT CCGACGCGCA GCTGAAGGAA CTGAGCATCC GGGTCAAGAA GCAGACCGCA AGCGGTTAG
|
Protein sequence | MRSHYCGSVN ESHLDQEVTL CGWVNRRRDH GGVIFIDLRD REGLVQVVFD PDLPEVFATA ERVRSEYVLK VKGRVRRRPA GTENPDLPTG AIEVLGRELT VLNSAETPPF QLDEDEVNEE TRLRYRYVDL RRPAMQKRLQ MRARVSRTLR RFLEDNGFLD IETPMLTKAT PEGARDYIVP SRTHPGSFFA LPQSPQLFKQ LLMMGGMDRY YQIVRCFRDE DLRADRQPEF TQLDIETSFM DEEGIMGLME EMVRELFAQV LEVPLHTPFQ RMSYAEAMAR YGSDKPDLRI PLELTELTDI MGEVDFKVFS GPARDPAGRV AALRVPKGGE LSRKDIDDYT HFVGRYGAKG LAYIKVNDLN AGREGLQSPI LKFMPDTVVV EILGRTGAED GDLIFFGADK ARIVNEALGA LRVKLGHDLG LVERGWRPLW VVDFPMFEHD EKEGRWVALH HPFTAPRVER PEELTGNPGE MISRAYDMVL NGTEVGGGSV RIHTTAMQQA VFNLLGIGEA EARDKFGFLL DALKYGCPPH GGIAFGLDRL VMLMTGSQSI RDVMAFPKTQ TAHCPLTDAP AEVSDAQLKE LSIRVKKQTA SG
|
| |