Gene Tgr7_2193 details

Gene Information

• Locus tag: Tgr7_2193
• ID: 7317440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 2320644
• End bp: 2322590
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643617088
• Product: putative glutamate synthase (NADPH) small subunit
• Protein accession: YP_002514260
• Protein GI: 220935361
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.119268
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACTT CCAGCGATGA CATGAAACTG ACGTTCCGCA AATTCAAGGA CGGTGACCAC 
GAACGCCGCA GCTGGAAGGA CGCCATCTTC GAGGGCGATC ACTCCCACAA GTGCCCGGTC 
TACGTGCATC GCACCCCGCC CTGTCAGGGT TCCTGCCCCT CCGGTGAGGA CATTCGCGGC 
TGGCTGCAGA TCGTGCGCGG CATCGAGAAG CCCCCGGCCG ACATGAGCAT GCAGGAGTAC 
GCCTTCCGCC GCTCCACCAG CGCCAACCCC TTCCCCTCGG TGATGGGCCG CGTGTGCCCG 
GCGCCCTGCG AATCCGGCTG CAACCGCAAC GAGGTGGAAG ACTTCGTCGG CATCAACTCC 
GTGGAACAGT TCATCGGTGA CTCCGCCTTC AACCAGGGCT ACAAGTTTGA CGCCGCCCCG 
GCCCTGTCCG GCAAGCGCGT GGCCATCATC GGCGGCGGCC CCGGCGGCAT GTCGGCGGCC 
TATCACCTGC GCAAGCGCGG CCATGCCTCC ACCATCTTCG ACGACCACGA GGAACTGGGC 
GGCATGATGA TGTACGGCAT CCCCGAGTAC CGGGTGCCCC GCAACATCCT GCGCCACGAG 
ATCCAGCGCA TCCTGGACCT GGGCGGCATC GACGTGCGCC TAAAAACCCG TGTGGGCAAG 
GACGTCAGCA TGGAGGACGT GGAGAAGGAA TTCGACGCCG TGGTCTGGGC CGTGGGCTGT 
CAGACCGGCC GCAAACTGCC GGTGCCCGGT GGCGACGCCC CCAACTGCAT CACCGGTGTG 
GACTTCCTGG AGGCCTTCAA CACCGGCCGC ATCAAGGTCC TGAGCACCGA CAACATCGTC 
TGCGTGGGCG GTGGTGACAC CTCCATCGAC GTGGTCTCCG TGGCCCGCCG TCTGGGCCGC 
ATCGAGGCCG AGAACATCAC CGACAACCCG GAAGACATGA TCCACGGCTA CGTGGCCCAC 
GACAGCGCCA TGAGTGCCAT GCGCACCGGT GCCAACGTGA CCCTGACCTC CCTGTTCCCC 
AAGGAGAAGA TGACGGCCGC CGAGCACGAG GTGCACGACG CCCTGCACGA GGGTGTGACC 
ATCCTCGACG GTGTGATGCC CGTTGAAGTG GTGCTCAACG ACAAGGGCCG CGCCGTGGGC 
CTGAAGATGG CCAAGTGCCA GTTCGAGGGC AACAAGCCCG TGCCCGTTGA AGGCACCGAG 
TTCGTGCTGG AGGCCAACCT GATCGTCTCC GCCATCGGTC AGGGCGGTGA CCTCAGCGGT 
CTGGAGTCCC TGGACAACGG CCGCGGCTTC ATCGACACCG ACAAGTTCTA CCAGGTACCC 
GGCAAGCAGG GTCACTTCGT GATCGGCGAC ATCATCCGCC CCCACCTGCT GACCACCGCC 
ATCGGCCACG GCGCCATCGC CGCCGACAGC ATCGATCATT ACCTGTCGCA CGAGGAGCCT 
ATCAAGCGCC CGCGCGTCGA TGTGCATCAC TTCAAGCTGC TCAACAAGCT GCAGGAGGTG 
GGCCTGAACC CCGAGGCCTA CTCCGGTGAG CAGGTGCGTG GTACCTCCGA GAGCAAGTTC 
GCGGTGCACA ACTTCGAGGA CCGTTCCGCC CAGGAGATCA TCTCCCACGA GAAGCTGTTC 
AAGGGCCACT TCCCGTTCAC CCCGCGCAAC AAGCGCAGCG AGCACGGCCC AAGCGCCGAC 
GAGGTGATCG GCCACTTCCA GGAGCGCATG GACTGCCTCA CCGAGGAACA GGCCGTGGCC 
GAGGCCAAGC GTTGCATGAG CTGCGGCATG TGCTTCGAGT GCGACAACTG CGTGATCTAC 
TGCCCGCAGA CGGCCGTGTA TCGCGTGCCC AAGAAAGAGG CCGCCACCGG CCGCTACGTG 
GCCACCGACT ACGCCAAGTG CGTGGGCTGC CACATCTGCG CCGAGGTCTG CCCCACCGGC 
TACATCGACA TGGCCATGGG TGACTGA 

 

Protein sequence

MATSSDDMKL TFRKFKDGDH ERRSWKDAIF EGDHSHKCPV YVHRTPPCQG SCPSGEDIRG 
WLQIVRGIEK PPADMSMQEY AFRRSTSANP FPSVMGRVCP APCESGCNRN EVEDFVGINS 
VEQFIGDSAF NQGYKFDAAP ALSGKRVAII GGGPGGMSAA YHLRKRGHAS TIFDDHEELG 
GMMMYGIPEY RVPRNILRHE IQRILDLGGI DVRLKTRVGK DVSMEDVEKE FDAVVWAVGC 
QTGRKLPVPG GDAPNCITGV DFLEAFNTGR IKVLSTDNIV CVGGGDTSID VVSVARRLGR 
IEAENITDNP EDMIHGYVAH DSAMSAMRTG ANVTLTSLFP KEKMTAAEHE VHDALHEGVT 
ILDGVMPVEV VLNDKGRAVG LKMAKCQFEG NKPVPVEGTE FVLEANLIVS AIGQGGDLSG 
LESLDNGRGF IDTDKFYQVP GKQGHFVIGD IIRPHLLTTA IGHGAIAADS IDHYLSHEEP 
IKRPRVDVHH FKLLNKLQEV GLNPEAYSGE QVRGTSESKF AVHNFEDRSA QEIISHEKLF 
KGHFPFTPRN KRSEHGPSAD EVIGHFQERM DCLTEEQAVA EAKRCMSCGM CFECDNCVIY 
CPQTAVYRVP KKEAATGRYV ATDYAKCVGC HICAEVCPTG YIDMAMGD