| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2149 |
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| Symbol | |
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| ID | 7318253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2279732 |
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| End bp | 2280298 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643617044 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_002514216 |
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| Protein GI | 220935317 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGACCGGA CGAACGCGAC GGACAACGAA GTCTCTCTCG ACCGGTTCCT GTCCGGGGTT
CAGGCACGGG CAGTGCGCAT GGCCGCCCTG GCGCTCAATG ACCGCGACGC GGCCCTGGAT
GTGGTGCAGG ACGCCATGGA GAAGCTGATC ACCCGCTACG CTGACAGGCC GGAGTTCGAG
TGGCAGCCGT TGTTCTGGCG CATCCTGCAG AGCCGGATCA TGGATGCCCA TCGCCGGCGC
AGCGTACGCA ACCGCGTGGT CTCCCTGTTC GGTTTCGCGG GCAACGGCCA CGACGAGGAC
GACCGGGACA TGGGGCCGGA CGACTGGGCC GACACCCGCA CCCCGGAACC GGACCAGGCC
TTGAGTGACG AGCACTTCGG CAATGATCTG GAGAGGGCCC TGGCATCGCT GCCCCTGCGC
CAGCAACAGG CCTTCCTGCT ACGGGTCTGG GAAGGACTGG ACACCGCCGA GACGGCCCAG
GCCCTGGGCA TCAGCGAGGG CAGCGTGAAG ACCCATGTGC ACCGTGCCAT GGCCGCACTC
AGGCAGCGGC TGGAGGCGTA CCGATGA
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| Protein sequence | MDRTNATDNE VSLDRFLSGV QARAVRMAAL ALNDRDAALD VVQDAMEKLI TRYADRPEFE
WQPLFWRILQ SRIMDAHRRR SVRNRVVSLF GFAGNGHDED DRDMGPDDWA DTRTPEPDQA
LSDEHFGNDL ERALASLPLR QQQAFLLRVW EGLDTAETAQ ALGISEGSVK THVHRAMAAL
RQRLEAYR
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