| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2146 |
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| Symbol | prfC |
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| ID | 7318250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2276983 |
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| End bp | 2278578 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617041 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002514213 |
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| Protein GI | 220935314 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCA AGCACGCCAC CGAGACCGCC CGCCGTCGCA CCTTTGCGAT CATCTCCCAC
CCGGACGCGG GCAAGACCAC CATCACCGAG AAGCTGCTGC TGTTCGGCGG TGCCATCCAG
CTGGCCGGCA CCGTGAAGGG CCGCAAGGCG GCGCGCCATG CTACCTCCGA CTGGATGGAG
CTGGAGAAGC AGCGCGGCAT TTCCGTGACC TCCTCCGTCA TGCAGTTCCC CTACAAGGGG
CGCATCGTGA ACCTGCTGGA CACCCCGGGC CACGAGGACT TCTCCGAGGA CACCTACCGC
ACCCTGACCG CCGTGGACTC GGCGCTCATG GTCATCGACG TGGCCAAGGG CGTGGAGGAG
CGCACCATCA AGCTCATGGA CGTGTGCCGC ATGCGCGACA CGCCCATCAT GACCTTCATC
AACAAGCTGG ACCGGGAGGG CCGCGAGCCC ATCGACCTGC TGGACGAGGT GGAGCAGGTG
CTCAAGATCC AGTGCGCCCC GGTGACCTGG CCCATCGGCA TGGGCAAGCG CTTCAAGGGC
GTGTACCACA TCCACAACGA CGCGGTGCAC CTGTACTCGC CCACCCACGG CGGCAAGATC
CAGCACGGCG AGGTGATCCA GGGGCTGGAC AACCCGCGCC TGGATGAGCT GCTGGGCGGT
CAGGCCGCCG AGCTGCGCGA GGAGCTGGAG CTGGTGATGG GCGCGTCCCA CAGCTTCGAC
AAGGCCGAGT ACTTGGCCGG CCGCCAGACC CCGGTGTTCT TCGGCTCTGC CATCAACAAC
TTCGGCGTGC AGGAACTGCT GGACGACTTC GTGGAACACG CCCCGGGCCC GCTGCCCCGG
GCCACCGAGA GCCGCACCGT GGATCCCGCC GAGGAGACCT TCAGCGGCTT CGTGTTCAAG
ATCCAGGCGA ACATGGACCC CCAGCACCGG GACCGCATCG CCTTCCTGCG GGTCTGCTCG
GGCACCTTCA GCAAGGGCAT GAAGGTGCAC CAGGTACGCA TCAAGCGGGA CGTGAAGATC
AGCGACGCAC TCACCTTCAT GGCCTCGGAC CGCGAGCACG TGGAGGAGGC CTATCCGGGC
GACATCATCG GCCTGCACAA CCACGGCACC ATCCGCATCG GCGACACCTT CACCCAGGGC
GAGCAGCTGA TCTTCACCGG CATCCCCAAC TTCGCCCCGG AACTGTTCCG CCGCGCCCAC
CTGCGCGATC CTCTGAAGAT GAAACAGCTG CAGAAGGGCC TGCAACAGCT CTGCGAGGAG
GGCGCCACCC AGCTGTTCAA GCCGCTCACC AACAACGACC TGATCCTGGG TGCGGTGGGC
GTGCTGCAGT TCGACGTGGT GGCCCATCGG CTCAAGGCCG AGTACAACGT GGACGCCAGC
TTCGAGAACG TGAACGTGCA GACCGCCCGC TGGGTGAGCT GTGACAACGC GCGCAAGTTT
GAGGAATTCC AGGAGAAGGC CGCGGCCAAC CTGGCCATCG ACCATGGCGG CGACCTGGTG
TACATCGCGC CCACCCGGGT GAACCTTCAG ATGGCCCAGG AGAAGTGGCC CGAGGTGCGC
TTCCACGCCA CCCGGGAGCA CGGCGTGGCC GCCTGA
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| Protein sequence | MSSKHATETA RRRTFAIISH PDAGKTTITE KLLLFGGAIQ LAGTVKGRKA ARHATSDWME
LEKQRGISVT SSVMQFPYKG RIVNLLDTPG HEDFSEDTYR TLTAVDSALM VIDVAKGVEE
RTIKLMDVCR MRDTPIMTFI NKLDREGREP IDLLDEVEQV LKIQCAPVTW PIGMGKRFKG
VYHIHNDAVH LYSPTHGGKI QHGEVIQGLD NPRLDELLGG QAAELREELE LVMGASHSFD
KAEYLAGRQT PVFFGSAINN FGVQELLDDF VEHAPGPLPR ATESRTVDPA EETFSGFVFK
IQANMDPQHR DRIAFLRVCS GTFSKGMKVH QVRIKRDVKI SDALTFMASD REHVEEAYPG
DIIGLHNHGT IRIGDTFTQG EQLIFTGIPN FAPELFRRAH LRDPLKMKQL QKGLQQLCEE
GATQLFKPLT NNDLILGAVG VLQFDVVAHR LKAEYNVDAS FENVNVQTAR WVSCDNARKF
EEFQEKAAAN LAIDHGGDLV YIAPTRVNLQ MAQEKWPEVR FHATREHGVA A
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