| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2144 |
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| Symbol | valS |
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| ID | 7318248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2273222 |
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| End bp | 2275984 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643617039 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_002514211 |
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| Protein GI | 220935312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGA CCTACGACCC CCGCGCCATC GAACAGTCCC TGTACGAGCA ATGGGAGCGC
GCCGGCCACT TCCGGCCCAG CGGTGAAGGC ACCCCCTACT GCATCATGCT GCCGCCGCCC
AACGTGACCG GCACCCTGCA CATGGGCCAC GCCTTCCAGC ACACCCTCAT GGACACCCTC
ATGCGCTACC ACCGCATGAG CGGCGACGAC GCCCTGTGGC AGGGCGGCAC GGACCACGCG
GGCATCGCCA CCCAGATGGT GGTGGAACGC CAGCTGGCCA CCGACAAGGT GAGCCGCCAC
GACCTGGGGC GTGAGAAATT CCTGGAGCGG GTCTGGCAGT GGAAGGAGCA GTCCGGCGGC
ACCATCACCC GGCAGATGCG CCGGCTCGGC AACAGCATCG ACTGGGAGCG GGAACGCTTC
ACCATGGACG AAGGCCTGTC CAGGGCGGTG CGCGAGGTGT TCGTGCGCCT CCATGACGAG
GGCCTCATCT ACCGGGGCAA GCGCCTGGTG AACTGGGACC CGGTGCTGCA CACGGCGGTC
TCGGACCTGG AGGTGATCAA CGAGGAGGAA CAGGGCAGCC TCTGGCACCT GCGCTACCCG
CTCGCCGACG GTTCCGGGCA CCTGGTGGTG GCCACCACCC GCCCCGAGAC CATGCTGGGC
GACACCGCCG TGGCCGTGCA CCCGGAGGAC GAGCGCTACC GGCACCTGAT CGGCAAGCAG
GTGGCCCTGC CGCTCACCGG CCGCAGCATC CCGGTGATCG CCGACGACTA CGTGGAACCG
GAATTCGGCT CCGGCTGCGT GAAGATCACC CCCGCCCACG ACTTCAATGA CTACGCCATG
GGACAGCGCC ACGACCTGCC CATGATCAAC ATCTTCACCG TGGACGCGAA GATCAACGAC
GAGGCCCCCG AGGCCTACCG GGGCCTGGAC CGCTTCGAGG CCCGCAAGCG CATCGTCGCC
GACCTGGAGG CCCAGGGCCT GCTGGAGCGC ATCGACGACC ACAAGCTCAT GGTGCCCCGG
GGCGATCGCA CCGGCGCGGT GATCGAGCCC TTCCTCACCG ACCAGTGGTA CGTGAAGGCC
GGCCCCCTGG CCGAGCCCGC CATCGCCGCC GTGGAGGACG GGCGCATCCG CTTCGTGCCC
GAGAACTGGA GCAAGACCTA CTTCGAGTGG ATGCGCAACA TCGAGGACTG GTGCATCTCC
CGCCAGATCT GGTGGGGCCA CCGCATCCCC GCCTGGTATG ACGCCGACGG CAACATCTAT
GTGGCCCACG ACGAGGCCGA GGTGCGCAAG AAATACAAGC TGGGTGCCGA GGTCGCGCTC
ACCCAGGACC CGGACGTGCT GGACACCTGG TTCAGCTCGG CGCTGTGGCC CTTCTCCACC
CTGGGCTGGC CGGAGAAGAC CCCGGAGCTT TCACGCTACT ACCCCACCAA CGTGCTGGTC
ACGGGCTTTG ACATCATCTT CTTCTGGGTC GCCCGGATGA TCATGATGGG GCTCAAGTTC
ATGGACGACG TGCCCTTCCG TGAGGTCTAC ATCACCGGTC TGATCCGCGA CGCGGAAGGC
CAGAAGATGT CCAAGTCCAA GGGCAACGTG CTGGACCCCA TCGATCTCAT CGACGGCATC
ACCCTGGACG CCCTGCTGGA GAAACGCACC CAGGGCCTCA TGCAGCCCCA GATGGCCAAG
AAGATCGACA AGGCCACCCG CAAGCAGTTT CCCGACGGCA TCCCGCCCTT TGGCACCGAC
GCCCTGCGCT TCACGCTCGC CTCGCTCGCC TCCACCGGCC GGGACATCAA GTTCGACCTG
GGCCGCATCG AGGGCTACCG CAACTTCTGC AACAAGCTGT GGAACGCCGC CCGCTACGTG
CTCATGAACA CCGAGGGCCA GGACACGGGT CTCGGCAACG AACCCGTGGA ACTGTCGCTC
GCCGACCGCT GGATCCAGTC ACGCCTGCAG GGCGCCATCA ATCAGGTGCG CGGCAACCTG
GACCAGTACC GCTTCGACCT GGCCGCCCAG GCCCTCTACG AGTTCACCTG GCACGACTAC
TGCGACTGGT ACCTGGAGCT GTCCAAGCCG GTGCTCACCG GCGACTCCAG CGCCGAGCAG
CAGCGCGGCA CGCGGCAGAC CCTGGTGCGG GTGCTGGATG CCCTGCTGCG CCTCATGCAC
CCCATCATGC CCTTCATCAC CGAGGCCATC TGGCGCCAGG TGGGCCCGCT GGCGGGAAGC
CAGGGCGACA CCCTCATGCA CCTGGCCTAC CCGGTCCGGG ACGAAGCCCG GGTGGATGCC
CAGGCGGAAA GCGAGATCGA GTGGGTGAAG ACCTTCATCC TGGGCATGCG CCGCATCCGC
GCCGAGATGG ACATCTCCCC GGGCAAGCCC CTGCCCCTGC TGATCGACAA CTGGAAGGAC
GCCGACCGGA GCCGCTACGC CCAGGCCGAG GCCTTCATCG GCTTCCTGGG CAAGCCCGAG
TCAGTCACCT GGCTTGATGC GGGCACTGAG GCCCCCGAAT CCGCCATGGC CCTGGTGGGC
GAGATGCGCC TGCTGATCCC GCTCGCGGGT CTGATCGACA AGGACGCCGA GATCGCCCGC
CTGGAAAAGG AACGGGCCAA GGTGCAGAAG AACCTGGAGG TGTGCAGCGC CAAGCTCGCC
AACCCCAGCT TCGTGGACCG CGCCCCCGCC GAGGTGGTGG ACAAGGAACG GGCCCGGGTA
GCGGAGATGG GCGTGACCCT CAAGGAACTG GAGTCGCAGC TTGAGAAGAT ACGAAGGCTC
TAG
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| Protein sequence | MDKTYDPRAI EQSLYEQWER AGHFRPSGEG TPYCIMLPPP NVTGTLHMGH AFQHTLMDTL
MRYHRMSGDD ALWQGGTDHA GIATQMVVER QLATDKVSRH DLGREKFLER VWQWKEQSGG
TITRQMRRLG NSIDWERERF TMDEGLSRAV REVFVRLHDE GLIYRGKRLV NWDPVLHTAV
SDLEVINEEE QGSLWHLRYP LADGSGHLVV ATTRPETMLG DTAVAVHPED ERYRHLIGKQ
VALPLTGRSI PVIADDYVEP EFGSGCVKIT PAHDFNDYAM GQRHDLPMIN IFTVDAKIND
EAPEAYRGLD RFEARKRIVA DLEAQGLLER IDDHKLMVPR GDRTGAVIEP FLTDQWYVKA
GPLAEPAIAA VEDGRIRFVP ENWSKTYFEW MRNIEDWCIS RQIWWGHRIP AWYDADGNIY
VAHDEAEVRK KYKLGAEVAL TQDPDVLDTW FSSALWPFST LGWPEKTPEL SRYYPTNVLV
TGFDIIFFWV ARMIMMGLKF MDDVPFREVY ITGLIRDAEG QKMSKSKGNV LDPIDLIDGI
TLDALLEKRT QGLMQPQMAK KIDKATRKQF PDGIPPFGTD ALRFTLASLA STGRDIKFDL
GRIEGYRNFC NKLWNAARYV LMNTEGQDTG LGNEPVELSL ADRWIQSRLQ GAINQVRGNL
DQYRFDLAAQ ALYEFTWHDY CDWYLELSKP VLTGDSSAEQ QRGTRQTLVR VLDALLRLMH
PIMPFITEAI WRQVGPLAGS QGDTLMHLAY PVRDEARVDA QAESEIEWVK TFILGMRRIR
AEMDISPGKP LPLLIDNWKD ADRSRYAQAE AFIGFLGKPE SVTWLDAGTE APESAMALVG
EMRLLIPLAG LIDKDAEIAR LEKERAKVQK NLEVCSAKLA NPSFVDRAPA EVVDKERARV
AEMGVTLKEL ESQLEKIRRL
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