Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2093 |
Symbol | |
ID | 7318196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2218131 |
End bp | 2219249 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643616987 |
Product | hypothetical protein |
Protein accession | YP_002514160 |
Protein GI | 220935261 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGG CACTGATTAC GGGGATCACC GGCCAGGATG GTTCTTACCT GGCTGAGTTC CTGCTGGAGA AGGGCTATGA GGTGCACGGC ATCAAACGCC GCGCGTCGCT ATTTAATACG GAGCGAATCG ACCATCTCTA CCAGGATCCC CACGAGCGGG ACCGGAAGTT GGTCCTCCAT TACGGGGATC TGACGGACTC GTCGAACCTC ATACGTATCA TTCAACAGGT CCGGCCCGAC GAAGTCTACA ACCTTGGCGC CCAGTCGCAT GTGGCAGTGA GTTTCGAGTC ACCGGAATAT ACGGCGGATG TGGACGCGCT GGGTACGCTG AGGCTGCTGG AGGCGATTCG TATCGCTGGT CTTGAGAAGG AGACGCGCTT CTACCAGGCC TCCACATCCG AGCTCTACGG CTTGGTCCAG GAAGTTCCCC AAAAGGAGAC AACGCCGTTT TACCCGCGCT CGCCATATGC CGCCGCAAAG CTCTATGCAT ACTGGATCAC GGTGAACTAT CGCGAGGCCT ACGGTATGTA TGCCTGCAAC GGTATTTTGT TCAACCATGA GTCCCCGCGC CGTGGAGAGA CCTTTGTCAC TCGCAAGATT ACGCGAGGCT TGTCGAATAT CGCCCAGGGT ATCGAGCAAT GTCTCTATCT TGGGAATATG GGTGCCCTTC GCGATTGGGG GCATGCCAAG GATTACGTGC GCATGCAGTG GCTGATGCTG CAGCAGGATC AGGCAGAAGA CTTCGTGATC GCAACAGGTG TGCAGTATTC CGTTCGTGAT TTTGTACGTA TGAGTGCCGA GGAATTGGGG ATTACGGTCC GATTCGAGGG AGACGGAGTG GAAGAGAAGG GTATCGTGGA AGCCGTATCC GGCGATTCGG CGCCTGCAGT GAAGCCAGGC GACATCATTG TGGCTGTGGA TCCTCGATAC TTTAGACCGA CTGAGGTGGA GACGCTGTTG GGGGATCCTA CACGCGCACG GGAACGACTG GGTTGGGTGC CGGAGATCTC CACTGAAGAG ATGGTACGCG AGATGGTGGC CTACGATCTT GATCAGGCGC GGCAGCATGC CTTGCTGATG AGGCACGGGT ATGAAGTGAA CGTTTCCCGT GAAAGCTGA
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Protein sequence | MKKALITGIT GQDGSYLAEF LLEKGYEVHG IKRRASLFNT ERIDHLYQDP HERDRKLVLH YGDLTDSSNL IRIIQQVRPD EVYNLGAQSH VAVSFESPEY TADVDALGTL RLLEAIRIAG LEKETRFYQA STSELYGLVQ EVPQKETTPF YPRSPYAAAK LYAYWITVNY REAYGMYACN GILFNHESPR RGETFVTRKI TRGLSNIAQG IEQCLYLGNM GALRDWGHAK DYVRMQWLML QQDQAEDFVI ATGVQYSVRD FVRMSAEELG ITVRFEGDGV EEKGIVEAVS GDSAPAVKPG DIIVAVDPRY FRPTEVETLL GDPTRARERL GWVPEISTEE MVREMVAYDL DQARQHALLM RHGYEVNVSR ES
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