Gene Tgr7_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2093 
Symbol 
ID7318196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2218131 
End bp2219249 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content56% 
IMG OID643616987 
Producthypothetical protein 
Protein accessionYP_002514160 
Protein GI220935261 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGG CACTGATTAC GGGGATCACC GGCCAGGATG GTTCTTACCT GGCTGAGTTC 
CTGCTGGAGA AGGGCTATGA GGTGCACGGC ATCAAACGCC GCGCGTCGCT ATTTAATACG
GAGCGAATCG ACCATCTCTA CCAGGATCCC CACGAGCGGG ACCGGAAGTT GGTCCTCCAT
TACGGGGATC TGACGGACTC GTCGAACCTC ATACGTATCA TTCAACAGGT CCGGCCCGAC
GAAGTCTACA ACCTTGGCGC CCAGTCGCAT GTGGCAGTGA GTTTCGAGTC ACCGGAATAT
ACGGCGGATG TGGACGCGCT GGGTACGCTG AGGCTGCTGG AGGCGATTCG TATCGCTGGT
CTTGAGAAGG AGACGCGCTT CTACCAGGCC TCCACATCCG AGCTCTACGG CTTGGTCCAG
GAAGTTCCCC AAAAGGAGAC AACGCCGTTT TACCCGCGCT CGCCATATGC CGCCGCAAAG
CTCTATGCAT ACTGGATCAC GGTGAACTAT CGCGAGGCCT ACGGTATGTA TGCCTGCAAC
GGTATTTTGT TCAACCATGA GTCCCCGCGC CGTGGAGAGA CCTTTGTCAC TCGCAAGATT
ACGCGAGGCT TGTCGAATAT CGCCCAGGGT ATCGAGCAAT GTCTCTATCT TGGGAATATG
GGTGCCCTTC GCGATTGGGG GCATGCCAAG GATTACGTGC GCATGCAGTG GCTGATGCTG
CAGCAGGATC AGGCAGAAGA CTTCGTGATC GCAACAGGTG TGCAGTATTC CGTTCGTGAT
TTTGTACGTA TGAGTGCCGA GGAATTGGGG ATTACGGTCC GATTCGAGGG AGACGGAGTG
GAAGAGAAGG GTATCGTGGA AGCCGTATCC GGCGATTCGG CGCCTGCAGT GAAGCCAGGC
GACATCATTG TGGCTGTGGA TCCTCGATAC TTTAGACCGA CTGAGGTGGA GACGCTGTTG
GGGGATCCTA CACGCGCACG GGAACGACTG GGTTGGGTGC CGGAGATCTC CACTGAAGAG
ATGGTACGCG AGATGGTGGC CTACGATCTT GATCAGGCGC GGCAGCATGC CTTGCTGATG
AGGCACGGGT ATGAAGTGAA CGTTTCCCGT GAAAGCTGA
 
Protein sequence
MKKALITGIT GQDGSYLAEF LLEKGYEVHG IKRRASLFNT ERIDHLYQDP HERDRKLVLH 
YGDLTDSSNL IRIIQQVRPD EVYNLGAQSH VAVSFESPEY TADVDALGTL RLLEAIRIAG
LEKETRFYQA STSELYGLVQ EVPQKETTPF YPRSPYAAAK LYAYWITVNY REAYGMYACN
GILFNHESPR RGETFVTRKI TRGLSNIAQG IEQCLYLGNM GALRDWGHAK DYVRMQWLML
QQDQAEDFVI ATGVQYSVRD FVRMSAEELG ITVRFEGDGV EEKGIVEAVS GDSAPAVKPG
DIIVAVDPRY FRPTEVETLL GDPTRARERL GWVPEISTEE MVREMVAYDL DQARQHALLM
RHGYEVNVSR ES