| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2074 |
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| Symbol | |
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| ID | 7316464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2202690 |
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| End bp | 2204867 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616967 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_002514141 |
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| Protein GI | 220935242 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.296286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTC AGGAAAAGTC CATGATCCCA TCAGAGATCC GCCGGATTCT TGATGCCCGT
CATCATGACC CCTTTTCGGT CCTGGGATAC CACGAGATCG GCGGCGAGTT CCTGGTGCGC
AGCTTCCTGC CCCAGGCCGC CGAGGCCTGG GTGGTGGAGG CCGGCGACGC CCCCATGGAA
CGCCTGGAGG GCACGGACCT GTTCGAATGG CGCGGCGATG CACTGCCCCG CCCCTATCGA
ATCCGCTGGA GCGACGGCCA CGGCCACGAA CACGTGGCCT GGGACCCCTA CGGCTTCGAG
CCCCTGCTCT CCGACTTCGA CATCCACCTG TTCAACGAGG GTCGTCACTG GCATGCCTGG
CGCCTCATGG GGGCCCATGT TCAGTCCGTG GGCGAGGTGG ACGGCGTGCG CTTCACCGTC
TGGGCCCCCG GTGCGGAACG GGTCAGCGTG GTGGGCGACT TCAACCGCTG GGACGGACGC
TGCCACCCCA TGCGGGTGCG CGGCGGCAGC GGCATCTGGG AGCTGTTCAT CCCCGGGCTC
GAACCCGGCT GCCTGTACAA GTACGAGATC CGCAACCGCG ACAGTGGCGA GATCATGGTC
AAGACCGACC CCTACGGCCA GAACTTCGAA CTGCGCCCCA AGACCGCCGG CGTGGTGCCC
GCGCCCGCCG ACTACGACTG GCAGGACGGC GAGTGGCTTG CCCGGCGCCA CGGCGACGCC
TGGCTGCACC GCCCCATGTC CATCTACGAG GTGCACCTGG GTTCCTGGCG GCGGGGACCG
GAGGGGGAGT TTCTCGGCTA CCGTGAACTG GCCCATGCCC TTGTGGACTA CGTGAAGCAG
CTCGGGTTCA CCCACATCGA ACTGCTGCCC GTCACCGAGC ACCCCTTCGA CGCCTCCTGG
GGCTATCAGA CCACCGGCTA CTACGCCCCC ACCAGCCGCT TCGGCACCCC CGAAGACTTC
CGCTATTTCG TGGATCACTG TCACGCCAAT GACATTGGCG TGATCCTGGA CTGGGCCCCC
GGCCACTTCC CCAAGGACCG CCACGCCCTG GCCCGCTTCG ACGGCACGGC CCTGTACGAA
CACGAGGACC CGCGCAAGGG CGAGCACCGG GACTGGGGCA CCCTGATCTT CAACTACGGC
CGCAACGAGG TGCGCAACTT CCTGGTGTCC AGCGCCCTGT ACTGGGTGGA GGAATTCCAC
ATCGACGGCC TGCGGGTGGA CGCGGTCGCC TCCATGCTCT ACCTCGACTA CTCGCGCGAA
CCCGGCGACT GGGAACCCAA CCGCTACGGC GGCAACGAGA ACCTGGAGGC CATCGACTTC
ATCCGGGAAC TCAACAACGT GGTCCAGGGC CAGCACCCCG GCGCCCTGAT CATCGCCGAG
GAATCCACCT CCTGGCCCCA GGTCACCCGC CCCACCTGGC TGGGCGGCCT GGGTTTCTCC
ATGAAGTGGA ACATGGGCTG GATGCACGAC ACCCTGGAGT ACTTCAAGAA GGACCCCATC
CACCGCCACT ACCACCACGA CCAGCTCACC TTCGGCCTGC TGTACGCCTT CACGGAGAAC
TTCGTCCTGC CCTTCTCCCA CGACGAGGTG GTGCACGGCA AACGCTCCCT GCTCTACCGC
ATGCCCGGCG ACGAGTGGCA GCGCTTCGCC AACCTGCGCC TGCTGTACAC CTACATGTGG
GCCTACCCCG GCAAGAAGCT GCTGTTCATG GGCAGCGAGT TCGGCCAGGG GGATGAATGG
GATGCCGCGA ACCAGCTGGA CTGGTACGTG CTCGACTACC CCCTGCACCA GGGCATGCAG
CACCTGGTGG GCGACCTCAA CCGTCTGTAC CGGGACCACC CCGCCCTGCA CCAGCACGAC
TTCGACTGGC AGGGCTTCGA GTGGATCGAC TGCCACGACG CCGCCCAGTC GGTGCTGAGC
TTCCTGCGCA AGGACGACGA TGAACTGATG GTGGTGGCCC TGAGCTTCAC CCCCGTGCCC
CGGGAGGGCT ACCGCCTGGG CGTGCCCCGC CCCGGCCGCT ACCAGGTGGT CCTCAACTCC
GACTCCAGCC ACTACGGCGG CAGCAACCTG GGCCAGCCCG CCGCCCAGAG CGAGGACATC
CCCTGGATGG GCCACCCCCA CTCCATCGTC CTGACCCTGC CGCCCCTGGG GGGGCTGATC
CTGCGGCACA GCGGCTGA
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| Protein sequence | MKVQEKSMIP SEIRRILDAR HHDPFSVLGY HEIGGEFLVR SFLPQAAEAW VVEAGDAPME
RLEGTDLFEW RGDALPRPYR IRWSDGHGHE HVAWDPYGFE PLLSDFDIHL FNEGRHWHAW
RLMGAHVQSV GEVDGVRFTV WAPGAERVSV VGDFNRWDGR CHPMRVRGGS GIWELFIPGL
EPGCLYKYEI RNRDSGEIMV KTDPYGQNFE LRPKTAGVVP APADYDWQDG EWLARRHGDA
WLHRPMSIYE VHLGSWRRGP EGEFLGYREL AHALVDYVKQ LGFTHIELLP VTEHPFDASW
GYQTTGYYAP TSRFGTPEDF RYFVDHCHAN DIGVILDWAP GHFPKDRHAL ARFDGTALYE
HEDPRKGEHR DWGTLIFNYG RNEVRNFLVS SALYWVEEFH IDGLRVDAVA SMLYLDYSRE
PGDWEPNRYG GNENLEAIDF IRELNNVVQG QHPGALIIAE ESTSWPQVTR PTWLGGLGFS
MKWNMGWMHD TLEYFKKDPI HRHYHHDQLT FGLLYAFTEN FVLPFSHDEV VHGKRSLLYR
MPGDEWQRFA NLRLLYTYMW AYPGKKLLFM GSEFGQGDEW DAANQLDWYV LDYPLHQGMQ
HLVGDLNRLY RDHPALHQHD FDWQGFEWID CHDAAQSVLS FLRKDDDELM VVALSFTPVP
REGYRLGVPR PGRYQVVLNS DSSHYGGSNL GQPAAQSEDI PWMGHPHSIV LTLPPLGGLI
LRHSG
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