| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2065 |
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| Symbol | secF |
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| ID | 7316454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2191426 |
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| End bp | 2192367 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643616957 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002514132 |
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| Protein GI | 220935233 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATT TCGCCAACGC CAACATCAAC TTCATGGGTC AGCGCCGTCT GTGGCTGGCC
GTGTCGGCGC TGTTGATCAT CGGGTCCATC GTTCTCATCG CAACACGCGG GCTCAATTTC
GGTATCGACT TCACCGGTGG CACGGTGATC GAGGTGGGGT ACCCGGAACC GGTAGAGCTC
GAGCAGGTGC GCGAGCAGCT GGATGCCGGT GGCTACGGTC GTGCCATCGT GCAGTACTTT
GGCACTTCTC AGGATGTCCT CATCCGTCTC GCGCCGCGGG AGGGCGAGAA CACCGCCGAC
CTGTCCAACG AGGTGCTCAG GTTGCTGCGC GCCGGTGCTG ACAACGGTGT GGACATGCGC
CGGGTGGAGT TCGTCGGACC CCAGGTGGGT GAGGAACTGC GCGAGCAGGG CGGACTGGCC
ATGCTCTATG CCCTGTTCGG CATCCTGATC TACGTGGCGT TGCGCTTCGA GTGGCGCTTC
TCGGTGGGTG CCGTGCTGGC GCTGGCCCAT GACGTGATCA TCACCCTGGG TATCTTCGCT
CTGCTGCAGA AGGAGTTTGA TCTCTCGGTC CTGGCCGCCG TGCTGGCAGT GATCGGTTAT
TCGCTCAACG ACACCATCGT GGTCTACGAC CGTATCCGGG AGAACTTCCG CAAGCTGCGT
AAGGAAAATG CCGAGCAGGT GATGAACAAG GCAGTCAACC AGACACTTTC ACGTACCATC
ATGACGGGTG TGACCACGCT GCTGGTGCTG CTGGCCCTGT TCTTCTTGGG CGGTGCGGTG
ATCAACGGCT TCGCCCTGGC CCTGATCATC GGCGTGCTGG TGGGTACCTA CTCATCCATC
TACATCGCCG CTGCACTGGC CCTGGTCATG GGCGTGGACC GCACGGTGAT GCTGCCGGTG
AAGAAGGAAG GCGAGGATAC CCCGGAGGAA GGGCGGCCCT GA
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| Protein sequence | MLNFANANIN FMGQRRLWLA VSALLIIGSI VLIATRGLNF GIDFTGGTVI EVGYPEPVEL
EQVREQLDAG GYGRAIVQYF GTSQDVLIRL APREGENTAD LSNEVLRLLR AGADNGVDMR
RVEFVGPQVG EELREQGGLA MLYALFGILI YVALRFEWRF SVGAVLALAH DVIITLGIFA
LLQKEFDLSV LAAVLAVIGY SLNDTIVVYD RIRENFRKLR KENAEQVMNK AVNQTLSRTI
MTGVTTLLVL LALFFLGGAV INGFALALII GVLVGTYSSI YIAAALALVM GVDRTVMLPV
KKEGEDTPEE GRP
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