Gene Tgr7_2060 details

Gene Information

• Locus tag: Tgr7_2060
• ID: 7316449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 2187635
• End bp: 2188123
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643616952
• Product: iron-sulphur cluster assembly transcription factor IscR
• Protein accession: YP_002514127
• Protein GI: 220935228
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0325541
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTGA CAACCAAGGG ACGCTATGCC GTAACGGCGA TGCTCGACCT GGCCATCCAT 
AACGAACAGG GACCGATCTC CCTGGCCGAT ATTTCACATC GGCAGGGTAT CTCACTGTCT 
TACCTGGAGC AACTGTTCGC CCGCCTGCGC AAGCAGGGCC TGGTGGTGAG CACCCGGGGC 
CCCGGCGGTG GTTACTCCCT GAGCCGTCCC GCGGACAAGA CCGCCATCGC CGATGTGATC 
GCGGCGGTGG ACGAGAAGGT GGACACCACC CGCTGCGGTG GCGCCGCCGA CTGCCAGAAC 
AACCAGCGCT GCCTGACCCA CGACCTGTGG TCTGACCTGA GCGACCAGAT CCGGCAGTTT 
CTCACCAACA TCACCCTGGC CGATGTCATG GCCCGCAACG GTGTCCAGGA AGTGGCCGCC 
CGTCAGGACC GTCAGGTGGG GCAGCGCGTG CTGCTCGCCC GGCGTGCCGA GTCGTTCCGG 
GCCGAGTGA 

 

Protein sequence

MRLTTKGRYA VTAMLDLAIH NEQGPISLAD ISHRQGISLS YLEQLFARLR KQGLVVSTRG 
PGGGYSLSRP ADKTAIADVI AAVDEKVDTT RCGGAADCQN NQRCLTHDLW SDLSDQIRQF 
LTNITLADVM ARNGVQEVAA RQDRQVGQRV LLARRAESFR AE