| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2050 |
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| Symbol | |
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| ID | 7316439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2179502 |
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| End bp | 2180278 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616942 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_002514117 |
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| Protein GI | 220935218 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.024552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCATG TCTCGTGGCA CCGCTGGACC CTGTTTGGAT TGCTGCTTGC CCTGCTGCTG
GGCGGCTGCG CCTCACAGCC CACCACCGAG AGCCGCGAGC GTGACCGGCG TGCCGCCGCC
ATCAACGTGG ACCTGGGCCT GCACTACCTG TCCAACAACA ACCTGGAGCA GGCACGCATC
AACCTGAACC GGGCGCTGGA GGTCGATCCG CGCTATTCCC AGGCCCACAG CGCCTTCGCG
CTGCTGCAGG TCCGGCTCAA CAACCCCGAG AACGCCGAGC GTCACTTCAA GCGCGCCCTG
GAACTGGACG CGGAAGACTC CTTCACCTGG AACAACTACG GCAGCTTCCT GTGCGCCCAG
GGCCGCAAGG CCGACGCCCA GCGCGCCTTC GACAAGGCAC TGGCCAATCC CTTCTACCGG
ACACCGGAGC AGGCCCTGAC CAATGCCGGC GTGTGCGTAA TGGAGACCGG TGATAACGCC
AAGGCGGAGG AATACCTGCG CCGCGCCCTG GACAACAACC CGCGCTACAC CCCGGCCCTG
CTGGAGATGG CGCGCCTGAC CTTCCAGGCG GAGCGCTACC TGCAGACCCG CGCCTTCCTG
TCGCGCTTCA CCGCCGAGCA GGAGCACACC GCCGAGACCC TGTGGCTCTG CTACCAGGCG
GAAACCGCCA TGCGCAACCA CGAGGCGGCG GGCAACTGTT CCGTGCGCCT GAAGGAGCGT
TTCCCGGATT CCCGCCAGAC CGCAGCGCTG CTGGAGCTGG AACGACGTGG CCGCTGA
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| Protein sequence | MMHVSWHRWT LFGLLLALLL GGCASQPTTE SRERDRRAAA INVDLGLHYL SNNNLEQARI
NLNRALEVDP RYSQAHSAFA LLQVRLNNPE NAERHFKRAL ELDAEDSFTW NNYGSFLCAQ
GRKADAQRAF DKALANPFYR TPEQALTNAG VCVMETGDNA KAEEYLRRAL DNNPRYTPAL
LEMARLTFQA ERYLQTRAFL SRFTAEQEHT AETLWLCYQA ETAMRNHEAA GNCSVRLKER
FPDSRQTAAL LELERRGR
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