| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2033 |
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| Symbol | |
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| ID | 7316422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2158604 |
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| End bp | 2160802 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616925 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002514100 |
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| Protein GI | 220935201 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component
[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.105106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGG AACTGAATTT CGTCCTGCCG CACTGGCTGT ACTGGTCGGT GCTCCTGTTT
CTGCCCCCCA TCATGATGCT CATGGTCTGG CGCTCCCGAC GCCGGGGCGC AAGACCCACC
CAGAGCGCCG AGATCTTCGC CCATGGCGAA GAGGCCCTGG CCGGCACTCC GAGCAACCCG
GTGCTGCGCG CGGTGGAAGG CCTGTCCACC TTCACCGGCA CCTTCGTCGG CTACTGGTCC
CTGGTGGCGG TGGTGGTCTA CACCTACGAG GTCATCGCCC GCTACGCCTT CAACTCGCCC
ACCAACTGGG CGCACGAGTC CATGTTCCTG ATGTTCGGCA TGCAGTACCT CATCGCCGGC
GCCTACTGCC TGCGGGTGGA CGGTCACGTG CGCGTGGACG TGCTGTATTC CCGTTTCGGG
CCCGCCGTCA CCGCGGCCCT GGACATCCTC ACCTCGGTGA TCTTCTACCT GTTCCTGCTG
GTGCTGACGC TCACCGCCTG GACCTTCTTC GCCCAGTCCC TGTCCCAGGA GCAGTTCTTC
TTCGCCACCG GCTGGAGCAA CGAGGTCTCG TTCACCGAGT GGCGCATCCA GTACTACCCG
GTCAAGGGCG CCATGGTGCT GGGCGGCGTG CTGCTGCTGT TGCAGGGCAC GGTGCGGCTG
GTGAAGGACA TCCAGGCCTT CCGCGTCGCC ATCCGCCGGC ACACCGGGGC CCGCTGGCCC
CTGTGGGGCA TGGTGGGCGC CGCCGTGATC CTGGGCCTGG TGATCCTGCT GGAGATGGTC
AACGTGATCG TCTTCGGTGA CAGCCCCGAG CACCTGCTGT TCACCCTGGA AGGCTCCCTG
GAGGACATCG GCATCGGCAC CCTGACCCTG GTCATGACCG GTGCCCTGCT GGTGGTGCTG
CTGGCGGGCC TGCCGCTGGC CTTCGTCACC GGCGGGCTGG GCGTGCTGTT CATCTACCTG
GTGGGCAACC ACTACATGCT GAACATCATC CCCTCGCGCA TCTTCCCGCT GATGACCGAC
TACCAGCTCT CGGCCATCCC GCTGTTCATC TTCATGGCGG CCATGCTGGA AAAGGCCGGG
CTGATCGAGG ACCTGTTCGA CGTGGTCTAC CACTGGATCG GCGCCCTGCG CGGCGGTCTC
GCCGTGGCCA CCATCCTGGC CTCCACCCTG CTGGCGGCCA TGGTGGGCGT GATCGGCGCG
GCGGTGGTAA CCATGGGCAT CATCGCCCTG CCCGCCATGC TCAAGCGCGG CTACGACCCC
AAGATCGCCC TGGGCGCCAT CATGGCCGGC GGCACCCTGG GCATCCTCAT CCCGCCCTCC
ATCCTGGCCA TCATCTACGC CGTGGTGGCC GGCCAGTCCG TGGGCGAACT CTACCTGGGC
GCCCTGCTGC CCGGCCTGCT GCTCTCCGGT CTGTACATGG GCTACGTGGC CCTGCGTGCC
GGCTTCAACC CGAAGCTGGG CCCGGCGATG CCCCGGGAAG AGCGCGTCGA CCTGCCCCAG
CGCCTGCGCA TGCTGCGCAA CATGCTGGCG CCCATCAGCC TGGTGGTGCT GGTACTGGGC
GCCATCTTCA CCGGCATGGC CACCCCGGTG GAGGCCGCCG GCATCGGCAC CTTCGGCGCC
CTGGTGGTGG CCGCCCTGCA CGGGCGCCTC ACCTGGGTGA ACGTGCACGA CGCCTGCATG
ATGACGCTGA AGGCCACGGC CATGGTGCTG TGGATCATCT TCGGCGCCAC GGTATTCGTG
GGCTTCTACA TCCTCCAGGG CGGCCAGCAG TTCGTGCAGG AACTGATCGT CGGCACCGGC
CTCGGCCCCT ATGGCATCCT GATCCTCATC ATGCTGGTGC TGGTGCTGCT GGGCATGTTC
CTGGACTGGG TGGGCATCCT GCTGCTGGCG GTGCCCATCT TCGTGCCCCT GATCGCGGGG
CTGGCCTTCG AGGGGGTGTT CGGCCTGCCC GGGGTACCAC CGGAGAAGGT GGCCCTGTGG
TTCGGCGTGC TCTACCTGGT GAACATGCAG ATGAGCTTCC TCAGTCCGCC CTTCGGCTAC
GCCCTGTTCT ACCTGCGGGG TGTCGCGCCG CCGCACATCA GCATGGGCAC CACCTACAAG
TCCTCGCTGC CGTTCCTGGG CCTGCAGACC CTGGGCCTGA TCCTGTGCAT CCTGTTCCCG
GGCATCATCC TGTGGCTGCC GGGACTGGCC TACGGCTGA
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| Protein sequence | MNLELNFVLP HWLYWSVLLF LPPIMMLMVW RSRRRGARPT QSAEIFAHGE EALAGTPSNP
VLRAVEGLST FTGTFVGYWS LVAVVVYTYE VIARYAFNSP TNWAHESMFL MFGMQYLIAG
AYCLRVDGHV RVDVLYSRFG PAVTAALDIL TSVIFYLFLL VLTLTAWTFF AQSLSQEQFF
FATGWSNEVS FTEWRIQYYP VKGAMVLGGV LLLLQGTVRL VKDIQAFRVA IRRHTGARWP
LWGMVGAAVI LGLVILLEMV NVIVFGDSPE HLLFTLEGSL EDIGIGTLTL VMTGALLVVL
LAGLPLAFVT GGLGVLFIYL VGNHYMLNII PSRIFPLMTD YQLSAIPLFI FMAAMLEKAG
LIEDLFDVVY HWIGALRGGL AVATILASTL LAAMVGVIGA AVVTMGIIAL PAMLKRGYDP
KIALGAIMAG GTLGILIPPS ILAIIYAVVA GQSVGELYLG ALLPGLLLSG LYMGYVALRA
GFNPKLGPAM PREERVDLPQ RLRMLRNMLA PISLVVLVLG AIFTGMATPV EAAGIGTFGA
LVVAALHGRL TWVNVHDACM MTLKATAMVL WIIFGATVFV GFYILQGGQQ FVQELIVGTG
LGPYGILILI MLVLVLLGMF LDWVGILLLA VPIFVPLIAG LAFEGVFGLP GVPPEKVALW
FGVLYLVNMQ MSFLSPPFGY ALFYLRGVAP PHISMGTTYK SSLPFLGLQT LGLILCILFP
GIILWLPGLA YG
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