Gene Tgr7_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2009 
Symbol 
ID7316398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2132649 
End bp2133302 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID643616901 
ProductHhH-GPD family protein 
Protein accessionYP_002514076 
Protein GI220935177 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.483803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGGTC AGCGATTGCG CAAGGTGTAC CAGTTGTTGT TTGAGGCCCA CGGCCCCCAA 
CACTGGTGGC CGGCGAACAG TGGCTTCGAG GTGATGGTCG GGGCGGTGCT GACCCAGAAC 
ACCGCCTGGC GCAACGTGGA ACGGGCCATC GCCGCGCTGA AGGCAGCGAA TGCACTCTCG 
CCCGAGGCCA TGCTGGACCT CTCCGATGCC GAGCTGGCCC GGCTTATCCG TCCTTCCGGT 
TACTTCAACG TCAAGGCCCG CCGGCTCAAG GCCCTGTGCC GCTGGTACCT GGACCACGGC 
GGACGGCGGC GCCTGCGCCA CTGGCCCACG GAGAAGCTGC GGGCATCCCT GCTGTCGGTG 
CATGGCATCG GCCCCGAGAC CGCCGACGAT ATCCTGCTCT ACGCCTTCGA TCGTCCCGTG 
TTCGTCATCG ATGCCTACAC GCGCCGGCTG CTCGGCCGGC TGGGTCATCC CCATGCGCAG 
GCAGCCTACG ACGATTTCAG GATGTCACTG GAATCGACAC TGGGGCAGGA CGAACGACTG 
TATAACGAAT ACCACGCCCT GATCGTCGCC CATGGCAAGG ACGTGTGCAG GCCGAAGCCG 
CGCTGTGAGC AATGCGTTTT AAGTACGAAG TGTGAATTTG GAAGTGGGAC ATGA
 
Protein sequence
MNGQRLRKVY QLLFEAHGPQ HWWPANSGFE VMVGAVLTQN TAWRNVERAI AALKAANALS 
PEAMLDLSDA ELARLIRPSG YFNVKARRLK ALCRWYLDHG GRRRLRHWPT EKLRASLLSV 
HGIGPETADD ILLYAFDRPV FVIDAYTRRL LGRLGHPHAQ AAYDDFRMSL ESTLGQDERL 
YNEYHALIVA HGKDVCRPKP RCEQCVLSTK CEFGSGT