| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2002 |
|---|
| Symbol | |
|---|
| ID | 7316391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2123838 |
|---|
| End bp | 2125181 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643616894 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_002514069 |
|---|
| Protein GI | 220935170 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG ACCTTTTTGA TGCCTCACCT GTAAACGAGA CCGGCCGCCC CCTGGCGGAC
AGGATGCGGC CGCGAAATCT GGACGAGTAC GCGGGTCAGT CGCACCTGCT GGCGCCGGGC
AAGCCGCTGC GCCGGGCCAT CGAAGAGGAC CGCCTGCACT CCATGCTGTT CTGGGGGCCG
CCGGGCACCG GCAAGACCAC CCTGGCGCGC ATGATCGCCC ACTACTGCGG CGCCCAGTTC
CTGACCCTGT CCGCCGTGCT CTCCGGGGTG AAGGACATCC GCGCCGCCGT CGAGCAGGCC
CGGGAATACC GGCGCATGCA CGGCAAGCCC ACGGTGCTGT TCGTGGACGA GGTGCACCGC
TTCAACAAGT CCCAGCAGGA TGCCTTCCTG CCCCACGTGG AGGACGGCAC CATCGCCTTC
GTGGGCGCCA CCACGGAAAA CCCGTCCTTC GAGCTCAACA ACGCGCTGCT GTCCCGGGTG
CGCACCTACG TGCTCAAGGC GCTCACGGAC GGCGACATCC GCGCCATCAT CGACCGGGCC
CTGGCGGACG AGGAACGGGG CCTGGGTGGT CGTCATCTGC ACATGGCGGA CGAGTTGCGT
GACCGGCTGG CCAGGGCCGC CGACGGCGAC GCGCGCCGGG CGCTCAATCT GCTCGAGATC
GCCGCCGACC TGGCGCAGGA GGGGCCGCAA GGCGCCGAGA TCACCGAGGC GACCCTGGAC
GAGGTCACCA GCCAGGGCCT GCGCCGCTTC GACAAGGGCG GCGAACTGTT CTACGACCAG
ATCTCCGCCC TGCACAAGTC CGTGCGCGGC TCCAATCCGG ACGCCGCCTT GTACTGGCTG
TGCCGCATGA TCGACGGCGG CTGCGATCTG GTGTATCTGT CCCGGCGCAT CGTGCGCATG
GCCAGCGAGG ACATCGGCAA CGCCGACCCC CGGGGTCTGA CCCTGGCCCT GGAGGCCTGG
GACGTGTACG AGCGTCTGGG CTCGCCGGAA GGGGAGCTGG CCCTGGCGCA GGCGGTGGTC
TACCTGGCCT GCGCGCCCAA GAGCAACGCC GTGTACATGG CCTACAACCA GGCCATGGCC
GAGGTGCGCG AGACGGGCAC CCTGGAGGTG CCGATGCACC TGCGCAACGC GCCCACCAAG
CTCATGAAGT CCCTGGACTA CGGCAAGGGC TACCGCTACG CCCACGACGA GCAGGATGGC
TACGCCGCCG GTGAGCGCTA TTTCCCCGAT GAGATGGGTG AGCGGCACTA CTACCGGCCC
GTGAACCGGG GGCTGGAGAT CCGCATCGCG GAGAAGCTGG AGGAGTTGCG CCGCCGGGAC
GAGGAAGCAG GAAAAAAGAA GTAG
|
|---|
| Protein sequence | MTDDLFDASP VNETGRPLAD RMRPRNLDEY AGQSHLLAPG KPLRRAIEED RLHSMLFWGP
PGTGKTTLAR MIAHYCGAQF LTLSAVLSGV KDIRAAVEQA REYRRMHGKP TVLFVDEVHR
FNKSQQDAFL PHVEDGTIAF VGATTENPSF ELNNALLSRV RTYVLKALTD GDIRAIIDRA
LADEERGLGG RHLHMADELR DRLARAADGD ARRALNLLEI AADLAQEGPQ GAEITEATLD
EVTSQGLRRF DKGGELFYDQ ISALHKSVRG SNPDAALYWL CRMIDGGCDL VYLSRRIVRM
ASEDIGNADP RGLTLALEAW DVYERLGSPE GELALAQAVV YLACAPKSNA VYMAYNQAMA
EVRETGTLEV PMHLRNAPTK LMKSLDYGKG YRYAHDEQDG YAAGERYFPD EMGERHYYRP
VNRGLEIRIA EKLEELRRRD EEAGKKK
|
|---|
| |