Gene Tgr7_1995 details

Gene Information

• Locus tag: Tgr7_1995
• ID: 7316384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 2116385
• End bp: 2117074
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643616888
• Product: ABC transporter related protein
• Protein accession: YP_002514063
• Protein GI: 220935164
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.691117
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT CCCCACTCAT CGAACTGCAC GCCGTCACCC GCCGCTACGG GGAGGGTCAG 
CAGGCGCGCC GGGTGCTGGA CGGGGTGGAT GCCCGGGTGA TGCCCGGCGA GATCGTCGCC 
CTGCTGGGGC GCAGTGGCTC CGGCAAGTCC ACCCTGCTGA ATCTCATCTC GGGCATCGAC 
CTGCCGGACA GCGGCCGGGT GCTGGTGGAG GGCCGCGACA TCGCCAGCCT CTCGGAACGG 
GAGCGTACCC TGTTCCGCCG TCACCGCATC GGCTTCATCT ACCAGTTCTT CAACCTGATC 
CCGACCCTGA CCGTGGCCGA GAATGTGGCC CTGCCCCTGG AACTGGTGGG GCGGCGCGAC 
GGGGGCGAGG TCGCGCGGCT GCTCGACCGG GTGGGACTGG CGGGACGGGG CGACGAGGAC 
CCGGACCGGC TCTCCGGCGG CGAGCAGCAG CGGGTGGCCC TGGCCCGGGC CCTGATCCAC 
GCGCCCTCCG TGATCCTGGC CGATGAACCC ACCGGCAACC TGGACGCGGA GACCGGCGCC 
CAGGTCATGG ACCTGCTCAA GGGCCTGGTG CGCGGGCAGG GGGCGACCCT GGTGCTGGTG 
ACCCACAGCG CAGAGGTGGC GGCCGTGGCG GACCGGGTCT GGCGCCTGAC GGACGGACAC 
ATCCGCGACG ATCAGGACGA GGCCCCGTGA 

 

Protein sequence

MTDSPLIELH AVTRRYGEGQ QARRVLDGVD ARVMPGEIVA LLGRSGSGKS TLLNLISGID 
LPDSGRVLVE GRDIASLSER ERTLFRRHRI GFIYQFFNLI PTLTVAENVA LPLELVGRRD 
GGEVARLLDR VGLAGRGDED PDRLSGGEQQ RVALARALIH APSVILADEP TGNLDAETGA 
QVMDLLKGLV RGQGATLVLV THSAEVAAVA DRVWRLTDGH IRDDQDEAP