Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1994 |
Symbol | |
ID | 7316383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2113875 |
End bp | 2116388 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643616887 |
Product | ABC transporter, permease protein |
Protein accession | YP_002514062 |
Protein GI | 220935163 |
COG category | [M] Cell wall/membrane/envelope biogenesis [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCTCA CCTCGCGCGC CCTGTGGCGG GACGCCCGGC GCCACCCCTG GCAATGGAGC CTGGCGCTGC TGGGCGTGGC CCTGGGGGTG GCGGTGGTGG TGGCCGTGGA CCTGGCCAAC CATAGCGCCT CCCGGGCCTT CGGTCTGTCC CTGGAGGCGG TCTCGGGCAA GGCCACCCAC CGGATCGAGG CCACCGGCCC CGGGGGGCTG GACGAGGCCC TGTTCACCCG CCTGCGCATG GCCGGCATCC GGCCCAGCGC CCCGGTGGTG GAGGGCCACG TGCGCGTGGA CGGCGAGACC TTCCCGTTGC TCGGCCTGGA GCCCTTCTCC GAGGCCCCGT TCCGGAGTCA TCTGACCGGG GTGCTGGACC CCGCGGCACG GGAGCTGGTT GCGCGGCCCG ACACCCTGGC GCTCAGCCGC GGACTCGCCC GGCGTCTGGG TCTTGAGGCT GGGGACAGTC TTACGGTCAC CGCCGCCTCG GGACGGCAGG CGCTCACCGT GGGCGCCATC CTGGAATCCC CGGCGCCCGG GGTGGAGGGC CTGATGCTCA CCGACATCGC CACCGCCCAG GTGCTGCTGG AGCGGGTGGG AAGGCTGGAC CGCATCGACC TGATCCTGCC GCAGGGCGCC GATCCCGATA CCCTGCTGGC CGGGTTCCTG CCGCCGGGTG CCCGGGTGCT GGAGACCGGG GCGCGGGAAG ACTCGGCGCG GCAGTTGACC CGGGCCTTTC ACATCAACCT CACCGCCATG AGTCTGCTGG CCCTGCTGGT GGGCGGTTTC CTCATCTACA ACACCCTCAT GTTCGCGGTG CTGCGCCGCC GCCCGCTGCT GGCCGCACTG CGCACCCTGG GCGTGACCCG GGCCGAGATC TTCCGGCTGG TGCTGCTGGA GGCCACGGTG CTGGCCCTGC TGGGGGGTGT GCCCGGGCTG CTGCTCGGAC TGCTGGTGGG GCAGGGCCTG GTGCAGCTGG TGACGCGCAC CATCAATGAC CTCTATTTCG TGCTCTCGGT GACCGGCCTG CACGTCTCCC CATGGCTGTT GCTCAAGGGG CTCGGCCTGG GGCTGGGTGC AGCCTGGATC GCCGCCCTGG CACCCGCCTG GGAGGCGGCC CGCACCCGTC CCCGGGAAGG CTTGCGACGC TCGGGCCTGG AGCGGCGCGC CCACCGGCTC ATGCCCTGGC TGGCGCTGGC GGGCGTGGTG CTGATCCTGG CCGGTTACGG ATTGGTGCCG GCCAGCCAGG GGCTGGTGGC CGGATTCATC GCCCTGTTCC TGATGATCAT GGGCTACAGC CTGCTGGTGC CGCTCGGGGT CTGGTTGCTG TCCCGGCTGC TGGCCCGCCC CCTGGGCGGT GTGTTCGGCA TCACCGGTCG TCTTGCGGCA CGCGGTCTGG GTGCGGCGCT CAGCCGCACC GGCGTGGCGG TGGCGGCGCT CACGGTGGCG GTCTCGGCGA CGGTGGGCGT GGGCATCATG GTGGACAGCT TCCGCACCAC GGTGCAGGGC TGGCTGGGCC ATACCCTGCA AAGCGCGCTT TACGTCACCT CGCCCGCACC CGGCGACGAG CGGGCCGGCT CTCTGCTGCC CGATGGCGTG ATGGAACGGG TCGGGTCCCT GCCGGAGGTG GCGGCCTTCA GCACCGGGCG GCGCATCCGG GTGGCCTCCA GTCACGGCGA TGTGGACCTT TTCGTCATGG ACCCGGCGCC GGCGAGCTTC GAGGGCTTCC GGTTCCGTGC CGGTTCACCG GCCCAGGCCT GGCCTCGTTG GCAGGCGGGG GAGGTGGTCC TGGTGTCCGA GCCCTTCGCC TGGCACCACC GGGTATCGGT GGGCGATGAA CTGAAGCTCC ACACCACAAA AGGCGAGCGG GTGTTTCCCG TGGCCGGTAT CTACCAGGAT TACGGTTCCC AGCAGGGCGT GGTGCTCATG GCCCGCGATC TGTATGAAAA ATTCTGGGAG GAACGCCGTG TCGGTTCCCT GGGGGTTTAT CTGGCGCCCG GGGTGGAGGT ATCCGCCGGG GTCGAGGCGG TGCGCCGCGC CCTGGCGGAT CTGCCAGAGC CGGTGCTGGT GACTGCCGCC GCCGAGATCC GCGAGGCCTC CATGGAGATC TTCGACCGCA CCTTCGCCAT CACCCACGTG CTGCGCCTGC TCACCGTGGG CGTGGCCTTC GTGGGCATCC TGAGCGCGCT CATGGCCCTG CAGCTGGAGC GCGCCCGGGA GCACGCCGTG CTGCGCGCCA CGGGCATGAC CCCGGGGCAG GTGACCGGCC TCGTGACCCT CCAGGGCGCG CTGCTGGGCC TGGCCGCCGG GCTGCTGGCC ATCCCCCTGG GCATGATGAT GGCGGACGTG CTGATCGACG TGATCAACCG ACGCTCCTTC GGCTGGAGCA TGCAGCAGCA CGTGCCGCCG GGTGTGCTGG TGGAGGCGGT CTGGCTGGCG GTGATCGCGG CCCTGCTGGC CGGCCTGCGT CCTGCGTGGC GCATGGGGCG GGTCAGGCCG GCACAGGCCT TGAGGGAAGA ATGA
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Protein sequence | MTLTSRALWR DARRHPWQWS LALLGVALGV AVVVAVDLAN HSASRAFGLS LEAVSGKATH RIEATGPGGL DEALFTRLRM AGIRPSAPVV EGHVRVDGET FPLLGLEPFS EAPFRSHLTG VLDPAARELV ARPDTLALSR GLARRLGLEA GDSLTVTAAS GRQALTVGAI LESPAPGVEG LMLTDIATAQ VLLERVGRLD RIDLILPQGA DPDTLLAGFL PPGARVLETG AREDSARQLT RAFHINLTAM SLLALLVGGF LIYNTLMFAV LRRRPLLAAL RTLGVTRAEI FRLVLLEATV LALLGGVPGL LLGLLVGQGL VQLVTRTIND LYFVLSVTGL HVSPWLLLKG LGLGLGAAWI AALAPAWEAA RTRPREGLRR SGLERRAHRL MPWLALAGVV LILAGYGLVP ASQGLVAGFI ALFLMIMGYS LLVPLGVWLL SRLLARPLGG VFGITGRLAA RGLGAALSRT GVAVAALTVA VSATVGVGIM VDSFRTTVQG WLGHTLQSAL YVTSPAPGDE RAGSLLPDGV MERVGSLPEV AAFSTGRRIR VASSHGDVDL FVMDPAPASF EGFRFRAGSP AQAWPRWQAG EVVLVSEPFA WHHRVSVGDE LKLHTTKGER VFPVAGIYQD YGSQQGVVLM ARDLYEKFWE ERRVGSLGVY LAPGVEVSAG VEAVRRALAD LPEPVLVTAA AEIREASMEI FDRTFAITHV LRLLTVGVAF VGILSALMAL QLERAREHAV LRATGMTPGQ VTGLVTLQGA LLGLAAGLLA IPLGMMMADV LIDVINRRSF GWSMQQHVPP GVLVEAVWLA VIAALLAGLR PAWRMGRVRP AQALREE
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