Gene Tgr7_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1978 
Symbol 
ID7316367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2097434 
End bp2097847 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID643616871 
Productflagellar protein FliS 
Protein accessionYP_002514046 
Protein GI220935147 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAGA CCGGCATCCA CCAGGCACTG AACCAGTACC GCGACGGCGC CCTGGCCGAG 
GTCAACGAGG CCAATCCCCA CCGGCTCATC CAGATGCTGT TCGACGGGGC CCTGGAGCGC 
ATCGCCACCG CCAAGGGGGC CATGCAGCAG GGCAACGTGG CGGTGAAGGG CGAGCGCATC 
AGCAAGGCCA TCGGCATCAT CGACGGTCTG CGCGCCCACC TGGACATGGA GAAGGGTGGC 
GAGGTGGCTG CAAACCTGGA CGCCCTGTAC GAATACATGG GCCGGCGCCT GACCGAGGCC 
AATCTGCGCA ACGACCCGGC CATGCTTGAC GAGGTGTCCA AACTGTTGCG GGAAGTGAAG 
GCCGGCTGGG ACGCCATCCC CGCCCAGCAG GCCGCCGAAG GCGATCGTGG CTGA
 
Protein sequence
MYQTGIHQAL NQYRDGALAE VNEANPHRLI QMLFDGALER IATAKGAMQQ GNVAVKGERI 
SKAIGIIDGL RAHLDMEKGG EVAANLDALY EYMGRRLTEA NLRNDPAMLD EVSKLLREVK 
AGWDAIPAQQ AAEGDRG