| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1960 |
|---|
| Symbol | |
|---|
| ID | 7316349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2079492 |
|---|
| End bp | 2080343 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643616853 |
|---|
| Product | sterol desaturase-related protein |
|---|
| Protein accession | YP_002514028 |
|---|
| Protein GI | 220935129 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.342543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT GGATCACCGC CAACGAGGCC GCCCTGCGGC TCGGTTTCTT CCTGGGCATC
CTGCTGCTGC TGGGCATCGC CGAGGCCCTG CTGCCCCGGC GTCAGCGCCT GCTCACCCGC
CTGCAGCGCT GGACCAGCAA CCTAGGCATC GTGGTGATCA ACACCGTGCT CCTGCGCCTG
CTGTTTCCCG CTGCGGCGGT GGGGATGGCG GTGTTCGCCC AGTCGACGGG CTGGGGGGTG
TTCAATACCT TCGAGCTGCC TTTCTGGATC GCGGTGCTGG TGTCGGTGCT GGTGCTGGAT
TTCATGATCT GGCTGCAGCA CGTGATGGTC CACGCGGTGC CTGCCCTGTG GCGCCTGCAC
CGGGTGCACC ACGCGGACCT GGACTTCGAT GTCACCACCG GCCTGCGCTT CCACCCCCTG
GAGATCATCC TGTCCATGGG GATCAAGTTC GCCGTGATCA CGGTGCTGGG CCCGCCGGTG
CTGGCGGTGA TCCTGTTCGA GATCCTGTTG AACGCCACCT CCATGTTCAA CCACAGCAAC
CTGCGTCTGC CCCTGGGCCT GGACCGGGTG CTGCGCCTGT TCGTGGTCAC CCCGGACATG
CACCGGGTGC ACCATTCCGT GGCCGATGAC GAGACCAACT CCAACTTCGG CTTCAACCTG
CCCTGGTGGG ATCGCCTGTT CGGCACCTAC AAGGCCCAGC CCCGGGAAGG CCACGAGGGC
ATGACCATCG GCATCGACAC CTTCCGCGAC CCGCGCCAGT GCGACGGCCT CAAGGGCATG
TTGCTGATGC CCTTCGTGGG CAAGGTCACC GACTACGCCA TCAACCGTCG CCAGTGGGAG
AAAAAGCCAT GA
|
|---|
| Protein sequence | MTEWITANEA ALRLGFFLGI LLLLGIAEAL LPRRQRLLTR LQRWTSNLGI VVINTVLLRL
LFPAAAVGMA VFAQSTGWGV FNTFELPFWI AVLVSVLVLD FMIWLQHVMV HAVPALWRLH
RVHHADLDFD VTTGLRFHPL EIILSMGIKF AVITVLGPPV LAVILFEILL NATSMFNHSN
LRLPLGLDRV LRLFVVTPDM HRVHHSVADD ETNSNFGFNL PWWDRLFGTY KAQPREGHEG
MTIGIDTFRD PRQCDGLKGM LLMPFVGKVT DYAINRRQWE KKP
|
|---|
| |