| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1915 |
|---|
| Symbol | |
|---|
| ID | 7315247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2039534 |
|---|
| End bp | 2040952 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643616808 |
|---|
| Product | pyruvate carboxylase subunit A |
|---|
| Protein accession | YP_002513983 |
|---|
| Protein GI | 220935084 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATACGCA AGATCCTGAT TGCCAACCGC GGCGAGATTG CCGTGCGCAT CATCCGTGCC
TGCGCCGAAA TGGGGATCAC CTCGGTGGCC GTGTACACCG ACGCGGACCG CCACAGCCTG
CATGTCAAGA AGGCCAACGA GGCCTACTCC ATCGGCCCCG ATTCCCTGGC CGGGTATCTC
AACGTGCACC GCATGGTCAA CGTGGCCCGG GCCGTGGGCT GTGATGCCAT CCACCCCGGC
TACGGCTTCC TGTCCGAGAA CCCCCAGTTC GCCCGCACCT GCGCCCAGCG CGGGGTGCGC
TTCATCGGCC CCTCGGCGGA GGTGATCCAC GCCATGGGCG ACAAGGTCCA GGCGCGGCGT
TCCATGATCG CCGCCGGGGT GCCGGTGGTG CCCGGCAGCG AGGGCAACCT GGCCAGCGTG
GACGAGGCCC TGGCCCTGGC CGAGCAGATC GGCTTTCCGG TGATGCTCAA GGCCACCACC
GGCGGCGGCG GGCGCGGCAT CCGCCGCTGC GACGATCCGG CCCAGCTGCG CAGCAACTAC
GAGCGGGTGC GCTCCGAGGC CACCAAGGCC TTCGGCAACA CCGAGATCTT CATGGAGAAG
GCCATCATCA ACCCGCGCCA CATCGAGGTG CAGGTGCTGG CCGACAGCCA CGGCAACGCC
ATCCACCTGT TCGAGCGCGA CTGTTCCATC CAGCGCCGCC ACCAGAAGCT GGTTGAGATC
GCCCCATCCC CCCAGTTGAG CGATGCTCAA CGCGCCTACG TGGGCGAGCT GGCGGTGCGC
GCCGCCAGGG CGGTGGGCTA CGAGAACGCC GGCACGGTGG AGTTCCTCAT GGATCACGAG
GACAACTTCT ACTTCATGGA GATGAACACC CGCCTGCAGG TGGAACACCC GGTCACCGAG
ATGATCACCG GCGTGGACAT CGTCCAGGAA CAGATCCGCA TCGCCTCGGG CCTGCCCATG
AGCTACGCCC AGGAGCAGGT GCAGCGCCGC GGCTTTGCCA TCGAGTTCCG CATCAACGCC
GAAGACCCCA AGAACGACTT CCTGCCAAGC TTCGGGCGTA TCACCCGCTA CTTCGCCCCG
GGCGGCCCGG GCGTGCGCAC CGACGGCGCC ATCTACACCG GCTACCACAT CCCGCCCCAC
TACGACTCCA TGTGCGCCAA GCTCATCGTC TGGGCCCTGG ACTGGGAAAG CCTGATCCGC
CGCGCACGCC GTGCACTTCA GGACATCGGT GTGTTCGGCG TGAAGACCAC CATCCCCTAT
CACCTGGAGA TCCTCGGCAA CGCGGAATTC CAGTCAGGGC GCTTCGACAC GGGCTTCGTG
GAGGCCCACC CGGAACTCAC CGACTACTCG GTGCGCCGCC CGGTCCGTGA ACTGGCGGCC
GTGATCGCCG CCGCCATCGC CGCCCACAAG GGCCTGTAA
|
|---|
| Protein sequence | MIRKILIANR GEIAVRIIRA CAEMGITSVA VYTDADRHSL HVKKANEAYS IGPDSLAGYL
NVHRMVNVAR AVGCDAIHPG YGFLSENPQF ARTCAQRGVR FIGPSAEVIH AMGDKVQARR
SMIAAGVPVV PGSEGNLASV DEALALAEQI GFPVMLKATT GGGGRGIRRC DDPAQLRSNY
ERVRSEATKA FGNTEIFMEK AIINPRHIEV QVLADSHGNA IHLFERDCSI QRRHQKLVEI
APSPQLSDAQ RAYVGELAVR AARAVGYENA GTVEFLMDHE DNFYFMEMNT RLQVEHPVTE
MITGVDIVQE QIRIASGLPM SYAQEQVQRR GFAIEFRINA EDPKNDFLPS FGRITRYFAP
GGPGVRTDGA IYTGYHIPPH YDSMCAKLIV WALDWESLIR RARRALQDIG VFGVKTTIPY
HLEILGNAEF QSGRFDTGFV EAHPELTDYS VRRPVRELAA VIAAAIAAHK GL
|
|---|
| |