Gene Tgr7_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1908 
Symbol 
ID7315240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2034451 
End bp2035107 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID643616801 
Producthypothetical protein 
Protein accessionYP_002513976 
Protein GI220935077 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.443294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCC ACTTCGATCC CCACTGCACC CGCTGCCCGC GCCTGAGCGG GTTTCTGGCC 
GACCTGCGCC AGAAACACCC CGGGTATCAC AATGCCCCCG TGGCGCCTTT CGGTGATCCC 
GAAGCCCGGC TGCTGATCGT TGGCCTGGCC CCGGGCATGC ACGGCGCCAA CGCCTCGGGA 
CGGCCCTTCA CCGGCGACTA CGCCGGCATC CTGCTCTACG AGACCCTGCA CCGCTTCGGC 
TTTGCCAGTC GCCCGGAATC GGTGTCCGCC GACGACGGGC TGGTGCTCAG TGATTGCCGC 
ATCACCAACG CGGTGAAGTG CCTGCCGCCG GCCAACAAGC CGGAGACCGG CGAGGTGGTG 
TGCTGCAACG ATTACCTGGC CGTGGAACTC AGGGGCCTGC CCCGGGACGC GGTGGTCCTG 
GCCCTGGGCA CCATCGCCCA CAATGCCGTC CTGCGCGCCC TGGGGATCAA GGCCAGCGCG 
CACCGCTTCG GCCATGGCGC CGAACATGAA CTCGACGGCC TGACCCTGAT CGATTCCTAC 
CACTGCAGCC GCTACAACAC CCAGACCCGG CGCCTGACCC CCGAGATGTT CCAGGCGGTG 
TTCGCCCGCA TCCGCGAGCG GCTGCCCGAA GCGCTGGCCC GGCAGCGGCG CGCCTGA
 
Protein sequence
METHFDPHCT RCPRLSGFLA DLRQKHPGYH NAPVAPFGDP EARLLIVGLA PGMHGANASG 
RPFTGDYAGI LLYETLHRFG FASRPESVSA DDGLVLSDCR ITNAVKCLPP ANKPETGEVV 
CCNDYLAVEL RGLPRDAVVL ALGTIAHNAV LRALGIKASA HRFGHGAEHE LDGLTLIDSY 
HCSRYNTQTR RLTPEMFQAV FARIRERLPE ALARQRRA