| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1904 |
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| Symbol | |
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| ID | 7315234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2029612 |
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| End bp | 2030886 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616795 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002513972 |
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| Protein GI | 220935073 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.1694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGACACCCC CGACCTCGCC ACGCCGCAGG CGGGCAAGGT CGCGCCCGAG
GCGGTGGCGC TGCGCGCCCA GCCGCGCCCG GTCACGCGCC TGAACCGGCG CACGCTGGCC
GTCCTTGTCG GCGGCCTGTC GGTCGCCGTG CTCGGGGCCA CGATCTGGTC GCTGCAACCG
CAACGGCGCG GCGCCAATGA GCAGACCGAG CTTTACAACG TCGATCGCGT GTCGAAGTCC
GAAGGGCTGG ATGGCCTGCC TTCGGACTAC TCGAAGCTGC CGCCGAAGGT GTCCGAGCTG
GGGCCGCCGC TGCCGGGTGA TCTCGGCCCG GCCATCGTGA ACTCGCAGCA GCCGGTGACG
CCGACGTATG TACCGCCGGG CCATGATCCC GAGGATGCCT TGCGCAAGGA GGCCGACGCG
GCAGCGGCCT CGTCGGTGTT CTTCCGCTCG GGCGGCCAAA GCCAGGCCGC CGCCACGGTG
ACGCAGGCGG TGCCGGGTGC GTCTGGTGGC GCAAGCACGC TGGCGGCCTT TGACCCGCTC
GCCGCTGGGC CGGCCTCGAC GGCGGCCCAG CCTGCCGACC CGACCGCCGT GCAGAACCGG
CAAGACCAGA AGGAGGCGTT CCTGAAAGCA GGCTCTACGG AAACCCGCAA TTCCGGCAAT
CTGGCGCTGC CGGTGTCGCC CTATCAGGTG ATGGCCGGAA CGGTGATCGC GGGCGCGCTG
GTGACGGGCA TCAAGTCCGA CCTTCCGGGC GACGTGATCG CCACGGTGAC GGAGCCGGTC
TATGACACGG CCACGGGCAA GTTCCTGCTG ATCCCGCAGG GATCGCGCAT CCTCGGGCGC
TACAACAGCC AGGTCAGCTA CGGGCAGAGC CGTGTGCAGG TGGTGTGGAA CCGGGTCATC
CTGCCCGATA CGTCCTCGCT GACGCTCGAC AGCCTTGTCG GCACCGACCC GGCCGGCTAC
GCCGGCCTGG AAGACGACGT GGACTGGCAT TGGAATCGCA TCGTCGCGGG CGCGGTGCTG
ACGACGCTGC TGGGCGTGGG CGCCGAGCTG GCTGCGCCGG AGAACCGTCA GGACGGCAAC
CGGATCGTCA TCGCCGGGCG CGATAGCGCA CAGGACAGCA TCAATCAGGT CGGGCAGGAG
ATCACCCGGC GCAACATGAA CATCCAGCCG ACGCTGACCA CGCGGCCGGG CCTGCCGGTG
CGGATCATCG TCAATCGGGA TCTGGTGCTT CGGCCCTACC AGCCACTGTT CTTCAATCGG
GGAGCTTCGC AATGA
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| Protein sequence | MSQDDTPDLA TPQAGKVAPE AVALRAQPRP VTRLNRRTLA VLVGGLSVAV LGATIWSLQP
QRRGANEQTE LYNVDRVSKS EGLDGLPSDY SKLPPKVSEL GPPLPGDLGP AIVNSQQPVT
PTYVPPGHDP EDALRKEADA AAASSVFFRS GGQSQAAATV TQAVPGASGG ASTLAAFDPL
AAGPASTAAQ PADPTAVQNR QDQKEAFLKA GSTETRNSGN LALPVSPYQV MAGTVIAGAL
VTGIKSDLPG DVIATVTEPV YDTATGKFLL IPQGSRILGR YNSQVSYGQS RVQVVWNRVI
LPDTSSLTLD SLVGTDPAGY AGLEDDVDWH WNRIVAGAVL TTLLGVGAEL AAPENRQDGN
RIVIAGRDSA QDSINQVGQE ITRRNMNIQP TLTTRPGLPV RIIVNRDLVL RPYQPLFFNR
GASQ
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