| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1903 |
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| Symbol | |
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| ID | 7315233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2028617 |
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| End bp | 2029609 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643616794 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_002513971 |
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| Protein GI | 220935072 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.11675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATC TTTTCCGTAA ATCCGCTTTG CCGGTGATCC TGCTTGCCTT GGCGGGCTGC
GCCACGCAGG GCAAACCGCC GCCGACCATC TCACTCGATG AGCCGGTACA GGCCCAGCCG
CTGCCAGAGC CGCCCGCGCC GGTAGAGGTG GTGGCCGTGC CCGAGGTACT GCCGATGCCC
GCGCAGTTGA AGCCGGCTCC CGAAGCCGAG GACGCCAAGC CTGTGCCGGA GCCGGCAGAC
GAGAAGGTGC GCGTTTCGCG TGCCAATGCC GAGGCGCGCG TCGCGCCCAC GCGCGAGGGC
TACGTCAACG CTATTCAGGT GTGGCCGTAT AGCGATGGTG CGCTCTATCA GGTCTATGCG
GCCGTGGGCC GCGTGACCGT GGTGTCGCTC CAGCCTGGCG AGGAACTAGT GACGGTGGCC
GCCGGCGATA CCGTGCGCTG GATCGTGGGC GACACGTCCA GCGGCAGCGG CGCCGACCTG
CGCGTGAACG TGCTGGTGAA GCCCATCCGC TCGGGCCTCA AGACCAATCT CGTCATCACC
ACCAACCGCA GAACGTACCT GCTGGAGTTG GCTTCGACAG AAAAGACGTG GATGGCATCG
GTGTCGTGGG AGTACCCGCG CGACCGGATG CTGGCCTTGC AGCGCCAGGC GCAAGCGGCC
AGCACCGCAG CGCCGGTCGA TAGCGGCCTG TCGCTGGAGA ACCTGCGCTT CCGCTACGCG
ATCAGCGGCA GCAATCCGCC GTGGAAGCCG CTGCGCGCCT TCGACGACGG GCAGAAAGTC
TATATCCAGC TTCCCGCCGG CATCGCGCAG GGCGATCTTC CGCCGCTGTT CGTGATCGGG
CCGGAAGGCG ACGGGCAATT GGTCAATTAC CGCTTCCGCT CGCCGTACTA CATCGTGGAT
CGGCTGTTCG GAGCCGCCGA ACTGCGCTTA GGTGGCGACA AGGGCGATGT GGTGCGAATC
GAGCGCACGG ATGGCGTGGC ACGGAGGAAC TGA
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| Protein sequence | MNDLFRKSAL PVILLALAGC ATQGKPPPTI SLDEPVQAQP LPEPPAPVEV VAVPEVLPMP
AQLKPAPEAE DAKPVPEPAD EKVRVSRANA EARVAPTREG YVNAIQVWPY SDGALYQVYA
AVGRVTVVSL QPGEELVTVA AGDTVRWIVG DTSSGSGADL RVNVLVKPIR SGLKTNLVIT
TNRRTYLLEL ASTEKTWMAS VSWEYPRDRM LALQRQAQAA STAAPVDSGL SLENLRFRYA
ISGSNPPWKP LRAFDDGQKV YIQLPAGIAQ GDLPPLFVIG PEGDGQLVNY RFRSPYYIVD
RLFGAAELRL GGDKGDVVRI ERTDGVARRN
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